RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 VSIG10LQ86VR7 867 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 PASD1Q8IV76 773 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 C4orf33Q8N1A6 199 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 SPOCK2Q92563 424 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 IMPG2Q9BZV3 1241 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 KIF9Q9HAQ2 790 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 SPON1Q9HCB6 807 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 RBAKQ9NYW8 714 aaPredicted RBP14.44□□□□□ -0.1
VPS33A-208ENST00000543633 CLUHO75153 1309 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 LTBP3Q9NS15 1303 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 KIF3CO14782 793 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 DNAJC6O75061 913 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 STAM2O75886 525 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 NEBLO76041 1014 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 TGDSO95455 350 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 CFHP08603 1231 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 KRT10P13645 584 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 KCNA2P16389 499 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 GLRA2P23416 452 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 RAD23BP54727 409 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 NLRP11P59045 1033 aaKnown RBP14.43□□□□□ -0.1
VPS33A-208ENST00000543633 GPX6P59796 221 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 PRKCEQ02156 737 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 GRIK3Q13003 919 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 WDR72Q3MJ13 1102 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 SPOPLQ6IQ16 392 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 CLNKQ7Z7G1 428 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 TMEM35BQ8NCS4 154 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 MZB1Q8WU39 189 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 ZNF606Q8WXB4 792 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 ELMO3Q96BJ8 720 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 NUDCD1Q96RS6 583 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 MAK16Q9BXY0 300 aaKnown RBP14.43□□□□□ -0.1
VPS33A-208ENST00000543633 IVNS1ABPQ9Y6Y0 642 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 PTPRJQ12913 1337 aa14.43□□□□□ -0.1
VPS33A-208ENST00000543633 MYH9P35579 1960 aaKnown RBP14.43□□□□□ -0.1
VPS33A-208ENST00000543633 CCDC189A1A4V9 331 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 PI4K2BG5E9Z4 385 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 SGK1O00141 431 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 ZSCAN5DPP0CG00 497 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 NAMPTP43490 491 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 TAZQ16635 292 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 CTC1Q2NKJ3 1217 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 XKR3Q5GH77 459 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 KAZNQ674X7 775 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 CIAPIN1Q6FI81 312 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 NIM1KQ8IY84 436 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 CPXCR1Q8N123 301 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 MMADHCQ9H3L0 296 aaPredicted RBP14.42□□□□□ -0.1
VPS33A-208ENST00000543633 ZFATQ9P243 1243 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.42□□□□□ -0.1
VPS33A-208ENST00000543633 NKX1-2Q9UD57 310 aaPredicted RBP14.42□□□□□ -0.1
VPS33A-208ENST00000543633 SEPT9Q9UHD8 586 aaPredicted RBP14.42□□□□□ -0.1
VPS33A-208ENST00000543633 STRIP2Q9ULQ0 834 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 PCDHGC3Q9UN70 934 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 CTDP1Q9Y5B0 961 aaPredicted RBP14.42□□□□□ -0.1
VPS33A-208ENST00000543633 DOCK5Q9H7D0 1870 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 CNTNAP2Q9UHC6 1331 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 CCDC22O60826 627 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 FAM155BO75949 473 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 KRT4P19013 534 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 CALRP27797 417 aaKnown RBP14.42□□□□□ -0.1
VPS33A-208ENST00000543633 EPHB2P29323 1055 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 RPL7AP62424 266 aaKnown RBP14.42□□□□□ -0.1
VPS33A-208ENST00000543633 CXCL9Q07325 125 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 EMC2Q15006 297 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 SEPT7Q16181 437 aaKnown RBP14.42□□□□□ -0.1
VPS33A-208ENST00000543633 TAF1BQ53T94 588 aaPredicted RBP14.42□□□□□ -0.1
VPS33A-208ENST00000543633 ZFYVE27Q5T4F4 411 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 LMBRD2Q68DH5 695 aaPredicted RBP14.42□□□□□ -0.1
VPS33A-208ENST00000543633 BBS12Q6ZW61 710 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 ZNF276Q8N554 614 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 NAT8LQ8N9F0 302 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 BANPQ8N9N5 519 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 PYROXD1Q8WU10 500 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 SPDL1Q96EA4 605 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 PAFAH2Q99487 392 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 TRIM55Q9BYV6 548 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 TMEM39BQ9GZU3 492 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 STOML1Q9UBI4 398 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 NUB1Q9Y5A7 615 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 LOC285556D6RIA3 1793 aa14.42□□□□□ -0.1
VPS33A-208ENST00000543633 A0A0B4J269 797 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 A0A1W2PPM1 405 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 HGSO14964 777 aaPredicted RBP14.41□□□□□ -0.1
VPS33A-208ENST00000543633 PPP1R12AO14974 1030 aaPredicted RBP14.41□□□□□ -0.1
VPS33A-208ENST00000543633 SPAG6O75602 509 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 HAUS5O94927 633 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 KRT7P08729 469 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 DHRS4L1P0CG22 281 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 GM2AP17900 193 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 EIF4BP23588 611 aaKnown RBP14.41□□□□□ -0.1
VPS33A-208ENST00000543633 ABL2P42684 1182 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 CTCFP49711 727 aaPredicted RBP14.41□□□□□ -0.1
VPS33A-208ENST00000543633 SOX10P56693 466 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 NCOA4Q13772 614 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 SGSM1Q2NKQ1 1148 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 DCUN1D2Q6PH85 259 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 ILDR2Q71H61 639 aa14.41□□□□□ -0.1
VPS33A-208ENST00000543633 MICAL1Q8TDZ2 1067 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms