RNA–Protein interactions for RNA: ENST00000543175.4

PTRH1-208, Transcript of peptidyl-tRNA hydrolase 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTRH1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTRH1-208ENST00000543175 PCDHA7Q9UN72 937 aa25.45■■□□□ 1.66
PTRH1-208ENST00000543175 R3HCC1Q9Y3T6 440 aaKnown RBP25.45■■□□□ 1.66
PTRH1-208ENST00000543175 PTPRZ1P23471 2315 aaPredicted RBP25.45■■□□□ 1.66
PTRH1-208ENST00000543175 PRPF40AO75400 957 aaKnown RBP25.44■■□□□ 1.66
PTRH1-208ENST00000543175 PRAMEF12O95522 483 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 TNNC2P02585 160 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 ACAT1P24752 427 aaKnown RBP25.44■■□□□ 1.66
PTRH1-208ENST00000543175 CSTF1Q05048 431 aaKnown RBP25.44■■□□□ 1.66
PTRH1-208ENST00000543175 PKP1Q13835 747 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 ARHGAP29Q52LW3 1261 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 OSTM1Q86WC4 334 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 WDR49Q8IV35 697 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 ADGRF2Q8IZF7 708 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 MSANTD3Q96H12 275 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 LRRC3BQ96PB8 259 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 PKMYT1Q99640 499 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 CHRDQ9H2X0 955 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 ABCB6Q9NP58 842 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 AGPAT3Q9NRZ7 376 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 ZMYM5Q9UJ78 669 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 VPS13AQ96RL7 3174 aa25.44■■□□□ 1.66
PTRH1-208ENST00000543175 ANAPC1Q9H1A4 1944 aa25.43■■□□□ 1.66
PTRH1-208ENST00000543175 TGFB1I1O43294 461 aa25.43■■□□□ 1.66
PTRH1-208ENST00000543175 HMGA1P17096 107 aaKnown RBP25.43■■□□□ 1.66
PTRH1-208ENST00000543175 CASP1P29466 404 aa25.43■■□□□ 1.66
PTRH1-208ENST00000543175 MYO1EQ12965 1108 aa25.43■■□□□ 1.66
PTRH1-208ENST00000543175 DUOXA2Q1HG44 320 aa25.43■■□□□ 1.66
PTRH1-208ENST00000543175 RESP18Q5W5W9 173 aa25.43■■□□□ 1.66
PTRH1-208ENST00000543175 IER2Q9BTL4 223 aa25.43■■□□□ 1.66
PTRH1-208ENST00000543175 BLZF1Q9H2G9 400 aa25.43■■□□□ 1.66
PTRH1-208ENST00000543175 PRMT8Q9NR22 394 aaPredicted RBP25.43■■□□□ 1.66
PTRH1-208ENST00000543175 CFAP45Q9UL16 551 aa25.43■■□□□ 1.66
PTRH1-208ENST00000543175 SLC38A8A6NNN8 435 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 GABRDO14764 452 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 KINO60870 393 aaKnown RBP25.42■■□□□ 1.66
PTRH1-208ENST00000543175 CSH1P0DML2 217 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 CSH2P0DML3 217 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 CCNE1P24864 410 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 LHX1P48742 406 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 GPR15P49685 360 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 NLRP12P59046 1061 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 MTAPQ13126 283 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 SNRNP35Q16560 246 aaKnown RBP25.42■■□□□ 1.66
PTRH1-208ENST00000543175 SOWAHAQ2M3V2 549 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 C1orf228Q6PIY5 440 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 DPH6Q7L8W6 267 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 TMEM150AQ86TG1 271 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 BPIFB1Q8TDL5 484 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 SCFD1Q8WVM8 642 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 HPDLQ96IR7 371 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 SLC46A2Q9BY10 475 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 C8orf33Q9H7E9 229 aaPredicted RBP25.42■■□□□ 1.66
PTRH1-208ENST00000543175 GTF3C4Q9UKN8 822 aa25.42■■□□□ 1.66
PTRH1-208ENST00000543175 F11P03951 625 aa25.41■■□□□ 1.66
PTRH1-208ENST00000543175 PCSK1P29120 753 aa25.41■■□□□ 1.66
PTRH1-208ENST00000543175 KPNA1P52294 538 aaPredicted RBP25.41■■□□□ 1.66
PTRH1-208ENST00000543175 SNRPFP62306 86 aaKnown RBP25.41■■□□□ 1.66
PTRH1-208ENST00000543175 RPL10AP62906 217 aaKnown RBP25.41■■□□□ 1.66
PTRH1-208ENST00000543175 DNM1Q05193 864 aaKnown RBP25.41■■□□□ 1.66
PTRH1-208ENST00000543175 NELFCDQ8IXH7 590 aa25.41■■□□□ 1.66
PTRH1-208ENST00000543175 ZFYVE19Q96K21 471 aa25.41■■□□□ 1.66
PTRH1-208ENST00000543175 LMAN1LQ9HAT1 526 aa25.41■■□□□ 1.66
PTRH1-208ENST00000543175 PCDHGA2Q9Y5H1 932 aa25.41■■□□□ 1.66
PTRH1-208ENST00000543175 HELZP42694 1942 aaKnown RBP25.4■■□□□ 1.66
PTRH1-208ENST00000543175 PVALEFA0A1B0GWK0 134 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 HCRTO43612 131 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 CYP2F1P24903 491 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 AFMP43652 599 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 SOX9P48436 509 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 CCDC142Q17RM4 750 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 CFAP221Q4G0U5 840 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 SDHAF4Q5VUM1 108 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 HS2ST1Q7LGA3 356 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 LIMS2Q7Z4I7 341 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 CMTM8Q8IZV2 173 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 CELF5Q8N6W0 485 aaKnown RBP25.4■■□□□ 1.66
PTRH1-208ENST00000543175 RDH13Q8NBN7 331 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 SPRYD3Q8NCJ5 442 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 ZBTB44Q8NCP5 570 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 STKLD1Q8NE28 680 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 NELL1Q92832 810 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 SMG9Q9H0W8 520 aaKnown RBP25.4■■□□□ 1.66
PTRH1-208ENST00000543175 RCOR1Q9UKL0 485 aa25.4■■□□□ 1.66
PTRH1-208ENST00000543175 MAGED2Q9UNF1 606 aaPredicted RBP25.4■■□□□ 1.66
PTRH1-208ENST00000543175 CFAP54Q96N23 3096 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 CLIC2O15247 247 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 NOL4O94818 638 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 CHRNB1P11230 501 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 DDX6P26196 483 aaKnown RBP eCLIP25.39■■□□□ 1.66
PTRH1-208ENST00000543175 CYP2J2P51589 502 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 PLCB2Q00722 1185 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 CUL4BQ13620 913 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 PSMD6Q15008 389 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 DDR2Q16832 855 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 BMT2Q1RMZ1 405 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 TSSK4Q6SA08 328 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 MAMSTRQ6ZN01 415 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 TRAPPC11Q7Z392 1133 aa25.39■■□□□ 1.66
PTRH1-208ENST00000543175 RALGPS2Q86X27 583 aaPredicted RBP25.39■■□□□ 1.66
PTRH1-208ENST00000543175 SPATA2LQ8IUW3 424 aaPredicted RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms