RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 DOCK8Q8NF50 2099 aa19.64■□□□□ 0.73
COPS7A-216ENST00000543170 A8MXQ7 604 aa19.63■□□□□ 0.73
COPS7A-216ENST00000543170 AFPP02771 609 aaKnown RBP19.63■□□□□ 0.73
COPS7A-216ENST00000543170 HAPLN1P10915 354 aaPredicted RBP19.63■□□□□ 0.73
COPS7A-216ENST00000543170 RAP1GAPP47736 663 aa19.63■□□□□ 0.73
COPS7A-216ENST00000543170 CETN1Q12798 172 aa19.63■□□□□ 0.73
COPS7A-216ENST00000543170 WDR44Q5JSH3 913 aa19.63■□□□□ 0.73
COPS7A-216ENST00000543170 CAVIN1Q6NZI2 390 aaKnown RBP19.63■□□□□ 0.73
COPS7A-216ENST00000543170 GRASPQ7Z6J2 395 aaPredicted RBP19.63■□□□□ 0.73
COPS7A-216ENST00000543170 IRF2BP1Q8IU81 584 aa19.63■□□□□ 0.73
COPS7A-216ENST00000543170 GJD3Q8N144 294 aa19.63■□□□□ 0.73
COPS7A-216ENST00000543170 TTC39CQ8N584 583 aa19.63■□□□□ 0.73
COPS7A-216ENST00000543170 TTC9BQ8N6N2 239 aa19.63■□□□□ 0.73
COPS7A-216ENST00000543170 LEMD2Q8NC56 503 aa19.63■□□□□ 0.73
COPS7A-216ENST00000543170 ENOX1Q8TC92 643 aaKnown RBP19.63■□□□□ 0.73
COPS7A-216ENST00000543170 NECAB3Q96P71 396 aaPredicted RBP19.63■□□□□ 0.73
COPS7A-216ENST00000543170 CRTAC1Q9NQ79 661 aa19.63■□□□□ 0.73
COPS7A-216ENST00000543170 GTF3C4Q9UKN8 822 aa19.63■□□□□ 0.73
COPS7A-216ENST00000543170 MYBPHLA2RUH7 354 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 MAGEA11P43364 429 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 ALDH1A3P47895 512 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 EPHB3P54753 998 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 EPHA5P54756 1037 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 PSMC1P62191 440 aaKnown RBP19.62■□□□□ 0.73
COPS7A-216ENST00000543170 KCNH2Q12809 1159 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 MGAT5BQ3V5L5 792 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 PABPC1LQ4VXU2 614 aaKnown RBP19.62■□□□□ 0.73
COPS7A-216ENST00000543170 IQCEQ6IPM2 695 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 OTOP3Q7RTS5 596 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 SPATA2LQ8IUW3 424 aaPredicted RBP19.62■□□□□ 0.73
COPS7A-216ENST00000543170 TDRD5Q8NAT2 981 aaKnown RBP19.62■□□□□ 0.73
COPS7A-216ENST00000543170 B3GALNT2Q8NCR0 500 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 MYCBPAPQ8TBZ2 947 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 MYLPFQ96A32 169 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 ELMO3Q96BJ8 720 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 TNIP3Q96KP6 325 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 SEPT5Q99719 369 aaPredicted RBP19.62■□□□□ 0.73
COPS7A-216ENST00000543170 DNAJC25Q9H1X3 360 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 CEP72Q9P209 647 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 DNMT3BQ9UBC3 853 aaKnown RBP19.62■□□□□ 0.73
COPS7A-216ENST00000543170 SLC27A5Q9Y2P5 690 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 MUC3AQ02505 3323 aa19.62■□□□□ 0.73
COPS7A-216ENST00000543170 LRRN2O75325 713 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 RHOP08100 348 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 PDGFRBP09619 1106 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 PTPN2P17706 415 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 ATF6P18850 670 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 CDH8P55286 799 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 ITIH5Q86UX2 942 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 ZDHHC14Q8IZN3 488 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 PLCD3Q8N3E9 789 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 PSMG2Q969U7 264 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 ACSF2Q96CM8 615 aaPredicted RBP19.61■□□□□ 0.73
COPS7A-216ENST00000543170 RPGRIP1Q96KN7 1286 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 CEP295NLQ96MC4 621 aa19.61■□□□□ 0.73
COPS7A-216ENST00000543170 ZNF512Q96ME7 567 aaPredicted RBP19.61■□□□□ 0.73
COPS7A-216ENST00000543170 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.61■□□□□ 0.73
COPS7A-216ENST00000543170 ZFP37Q9Y6Q3 630 aaPredicted RBP19.61■□□□□ 0.73
COPS7A-216ENST00000543170 C2CD4DB7Z1M9 353 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 ATP2C2O75185 946 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 MICAL2O94851 1124 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 LETM1O95202 739 aaPredicted RBP19.6■□□□□ 0.73
COPS7A-216ENST00000543170 PRKCSHP14314 528 aaPredicted RBP19.6■□□□□ 0.73
COPS7A-216ENST00000543170 PTPN1P18031 435 aaKnown RBP19.6■□□□□ 0.73
COPS7A-216ENST00000543170 TRIM21P19474 475 aaKnown RBP19.6■□□□□ 0.73
COPS7A-216ENST00000543170 FSHRP23945 695 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 SSTR3P32745 418 aaPredicted RBP19.6■□□□□ 0.73
COPS7A-216ENST00000543170 TYRO3Q06418 890 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 VEPH1Q14D04 833 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 CCDC142Q17RM4 750 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 VSTM1Q6UX27 236 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 PCED1BQ96HM7 432 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 DPEP3Q9H4B8 488 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 ASAH2Q9NR71 780 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 HCFC1R1Q9NWW0 138 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 MAGEC2Q9UBF1 373 aaPredicted RBP19.6■□□□□ 0.73
COPS7A-216ENST00000543170 NFE2L3Q9Y4A8 694 aa19.6■□□□□ 0.73
COPS7A-216ENST00000543170 ZNF197O14709 1029 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 CILPO75339 1184 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 TBXAS1P24557 533 aaPredicted RBP19.59■□□□□ 0.73
COPS7A-216ENST00000543170 NDST1P52848 882 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 RPL10AP62906 217 aaKnown RBP19.59■□□□□ 0.73
COPS7A-216ENST00000543170 NTHL1P78549 312 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 MAN2A1Q16706 1144 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 MDH1BQ5I0G3 518 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 PRSS36Q5K4E3 855 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 C11orf57Q6ZUT1 292 aaPredicted RBP19.59■□□□□ 0.73
COPS7A-216ENST00000543170 PDZD4Q76G19 769 aaPredicted RBP19.59■□□□□ 0.73
COPS7A-216ENST00000543170 GET4Q7L5D6 327 aaPredicted RBP19.59■□□□□ 0.73
COPS7A-216ENST00000543170 CRYBG2Q8N1P7 616 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 LMO3Q8TAP4 145 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 NT5C1BQ96P26 610 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 ELOVL4Q9GZR5 314 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 DNAI2Q9GZS0 605 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 CD320Q9NPF0 282 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.59■□□□□ 0.73
COPS7A-216ENST00000543170 EPS15L1Q9UBC2 864 aa19.59■□□□□ 0.73
COPS7A-216ENST00000543170 ATP8B3O60423 1300 aa19.58■□□□□ 0.73
COPS7A-216ENST00000543170 CUL9Q8IWT3 2517 aa19.58■□□□□ 0.73
COPS7A-216ENST00000543170 GTPBP10A4D1E9 387 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms