RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 PI4K2AQ9BTU6 479 aa18.74■□□□□ 0.59
PPP1CA-210ENST00000542876 STRA6Q9BX79 667 aa18.74■□□□□ 0.59
PPP1CA-210ENST00000542876 KIF9Q9HAQ2 790 aa18.74■□□□□ 0.59
PPP1CA-210ENST00000542876 UXTQ9UBK9 157 aaPredicted RBP18.74■□□□□ 0.59
PPP1CA-210ENST00000542876 FBXO2Q9UK22 296 aaPredicted RBP18.74■□□□□ 0.59
PPP1CA-210ENST00000542876 SOBPA7XYQ1 873 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 K7ESF4 209 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 HRO43593 1189 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 GARTP22102 1010 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 STAT6P42226 847 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 CEBPZQ03701 1054 aaKnown RBP18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 DMWDQ09019 674 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 KCNA1Q09470 495 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 GRSF1Q12849 480 aaKnown RBP eCLIP18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 TMEM86AQ8N2M4 240 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 PDCL2Q8N4E4 241 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 CSGALNACT2Q8N6G5 542 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 LRRC52Q8N7C0 313 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 EXOC4Q96A65 974 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 DNAJC19Q96DA6 116 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 CLIC6Q96NY7 704 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 ACBD6Q9BR61 282 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 OLFML3Q9NRN5 406 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 TDP1Q9NUW8 608 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 DDX43Q9NXZ2 648 aaKnown RBP18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 ITGA11Q9UKX5 1188 aa18.73■□□□□ 0.59
PPP1CA-210ENST00000542876 FOXD2O60548 495 aaPredicted RBP18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 ATG13O75143 517 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 F11P03951 625 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 KRT19P08727 400 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 HMGA1P17096 107 aaKnown RBP18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 HOXA6P31267 233 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 SRSF5Q13243 272 aaKnown RBP18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 CUL4AQ13619 759 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 RUNX3Q13761 415 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 WDR44Q5JSH3 913 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 C1orf127Q8N9H9 656 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 NETO1Q8TDF5 533 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 LEO1Q8WVC0 666 aaPredicted RBP18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 FAM83CQ9BQN1 747 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 TMEM206Q9H813 350 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 ABCB6Q9NP58 842 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 SEMA4GQ9NTN9 838 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 TMLHEQ9NVH6 421 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 L1RE1Q9UN81 338 aa18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.72■□□□□ 0.59
PPP1CA-210ENST00000542876 DCDC2BA2VCK2 349 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 EXTL3O43909 919 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 TMEM191BP0C7N4 346 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 RBP5P82980 135 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 CSRP2Q16527 193 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 INTS6LQ5JSJ4 861 aaKnown RBP18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 TXNDC8Q6A555 127 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 TMEM150AQ86TG1 271 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 MON1AQ86VX9 555 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 SPATA18Q8TC71 538 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 USP13Q92995 863 aaPredicted RBP18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 EBF3Q9H4W6 596 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 PANK4Q9NVE7 773 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 CCL26Q9Y258 94 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 SNX9Q9Y5X1 595 aa18.71■□□□□ 0.59
PPP1CA-210ENST00000542876 TSC2P49815 1807 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 GOLGA8IPA6NC78 632 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 GOLGA8JA6NMD2 632 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 ACAT1P24752 427 aaKnown RBP18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 PCSK1P29120 753 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 SCN1AP35498 2009 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 LHX1P48742 406 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 GPR15P49685 360 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 MYO1EQ12965 1108 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 PDGFRLQ15198 375 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 DDR2Q16832 855 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 SDHAF4Q5VUM1 108 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 TRIM68Q6AZZ1 485 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 STXBP4Q6ZWJ1 553 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 WDR5BQ86VZ2 330 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 SPATA2LQ8IUW3 424 aaPredicted RBP18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 ANKRD36BP1Q96IX9 119 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 CBWD1Q9BRT8 395 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 PANK2Q9BZ23 570 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 HPS4Q9NQG7 708 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 GDAP2Q9NXN4 497 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 SLC8A2Q9UPR5 921 aa18.7■□□□□ 0.58
PPP1CA-210ENST00000542876 KIAA0391O15091 583 aaKnown RBP18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 SYT1P21579 422 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 CYP2F1P24903 491 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 CASP5P51878 434 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 WNT7BP56706 349 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 RESTQ13127 1097 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 ZNF268Q14587 947 aaPredicted RBP18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 TMEM196Q5HYL7 178 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 FAM173BQ6P4H8 233 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 PRR23CQ6ZRP0 262 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 CCDC65Q8IXS2 484 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 ADGRF2Q8IZF7 708 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 GPD1LQ8N335 351 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 TOP6BLQ8N6T0 577 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 FSIP1Q8NA03 581 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 STKLD1Q8NE28 680 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms