RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 CPT1AP50416 773 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 PLTPP55058 493 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 SKOR1P84550 965 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 SLC25A11Q02978 314 aaKnown RBP14.97□□□□□ -0.01
LDB3-207ENST00000542786 ADCY2Q08462 1091 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 NFX1Q12986 1120 aaKnown RBP14.97□□□□□ -0.01
LDB3-207ENST00000542786 CCNG2Q16589 344 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 SYDE1Q6ZW31 735 aaPredicted RBP14.97□□□□□ -0.01
LDB3-207ENST00000542786 APBB1IPQ7Z5R6 666 aaPredicted RBP14.97□□□□□ -0.01
LDB3-207ENST00000542786 RCOR2Q8IZ40 523 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 TTC39CQ8N584 583 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 OR2W6PQ8NHA6 318 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 HEMGNQ9BXL5 484 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 NXF3Q9H4D5 531 aaKnown RBP14.97□□□□□ -0.01
LDB3-207ENST00000542786 LRRC4CQ9HCJ2 640 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 PRDM4Q9UKN5 801 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 HES2Q9Y543 173 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 SCN1AP35498 2009 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 RPS6KA5O75582 802 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 RECQL4O94761 1208 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 MYL3P08590 195 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 AXLP30530 894 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 PSMC1P62191 440 aaKnown RBP14.97□□□□□ -0.01
LDB3-207ENST00000542786 PURAQ00577 322 aaKnown RBP14.97□□□□□ -0.01
LDB3-207ENST00000542786 KRT17Q04695 432 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 PDCLQ13371 301 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 SNX1Q13596 522 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 ZNF268Q14587 947 aaPredicted RBP14.97□□□□□ -0.01
LDB3-207ENST00000542786 PKDCCQ504Y2 493 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 DCUN1D2Q6PH85 259 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 LCLAT1Q6UWP7 414 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 MFSD7Q6UXD7 560 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 SH2D3CQ8N5H7 860 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 LRRC52Q8N7C0 313 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 C18orf25Q96B23 403 aaPredicted RBP14.97□□□□□ -0.01
LDB3-207ENST00000542786 ATP6V1G3Q96LB4 118 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 KLHL11Q9NVR0 708 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 WHRNQ9P202 907 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 WDR35Q9P2L0 1181 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 PARP2Q9UGN5 583 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 GINS2Q9Y248 185 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 PTPN22Q9Y2R2 807 aa14.97□□□□□ -0.01
LDB3-207ENST00000542786 TRIP12Q14669 1992 aaPredicted RBP14.96□□□□□ -0.01
LDB3-207ENST00000542786 NUDT17P0C025 328 aa14.96□□□□□ -0.01
LDB3-207ENST00000542786 TAZQ16635 292 aa14.96□□□□□ -0.01
LDB3-207ENST00000542786 CEP85LQ5SZL2 805 aa14.96□□□□□ -0.01
LDB3-207ENST00000542786 SPOCD1Q6ZMY3 1216 aa14.96□□□□□ -0.01
LDB3-207ENST00000542786 POLNQ7Z5Q5 900 aa14.96□□□□□ -0.01
LDB3-207ENST00000542786 GOLGA6L1Q8N7Z2 621 aa14.96□□□□□ -0.01
LDB3-207ENST00000542786 RAPGEF5Q92565 580 aa14.96□□□□□ -0.01
LDB3-207ENST00000542786 RNF25Q96BH1 459 aaPredicted RBP14.96□□□□□ -0.01
LDB3-207ENST00000542786 RBM41Q96IZ5 413 aaKnown RBP14.96□□□□□ -0.01
LDB3-207ENST00000542786 MRPL45Q9BRJ2 306 aaKnown RBP14.96□□□□□ -0.01
LDB3-207ENST00000542786 AP5M1Q9H0R1 490 aa14.96□□□□□ -0.01
LDB3-207ENST00000542786 AAASQ9NRG9 546 aa14.96□□□□□ -0.01
LDB3-207ENST00000542786 KIAA1257Q9ULG3 409 aa14.96□□□□□ -0.01
LDB3-207ENST00000542786 hCG_1818297A0A087WSY0 165 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 MYADML2A6NDP7 307 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 PI4K2BG5E9Z4 385 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 GOLGA8SH3BPF8 625 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 M0QYV0 167 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 LRCH4O75427 683 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 KRT1P04264 644 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 KRT3P12035 628 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 IL1R2P27930 398 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 GJC1P36383 396 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 CDKN2BP42772 138 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 COPS2P61201 443 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 CRHR2Q13324 411 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 FSCN1Q16658 493 aaKnown RBP14.95□□□□□ -0.02
LDB3-207ENST00000542786 UBAP2Q5T6F2 1119 aaKnown RBP14.95□□□□□ -0.02
LDB3-207ENST00000542786 C9orf57Q5W0N0 161 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 LIMS2Q7Z4I7 341 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 CCDC50Q8IVM0 306 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 UBLCP1Q8WVY7 318 aaPredicted RBP14.95□□□□□ -0.02
LDB3-207ENST00000542786 PABPC3Q9H361 631 aaKnown RBP14.95□□□□□ -0.02
LDB3-207ENST00000542786 HOMER3Q9NSC5 361 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 ATP8A1Q9Y2Q0 1164 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 HMGB1P1B2RPK0 211 aaPredicted RBP14.95□□□□□ -0.02
LDB3-207ENST00000542786 KCNE1P15382 129 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 INHBEP58166 350 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 TRNP1Q6NT89 227 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 DRICH1Q6PGQ1 229 aaPredicted RBP14.95□□□□□ -0.02
LDB3-207ENST00000542786 KDM7AQ6ZMT4 941 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 ATL2Q8NHH9 583 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 HEXIM2Q96MH2 286 aaKnown RBP14.95□□□□□ -0.02
LDB3-207ENST00000542786 NT5C1AQ9BXI3 368 aa14.95□□□□□ -0.02
LDB3-207ENST00000542786 METTL5Q9NRN9 209 aaKnown RBP14.95□□□□□ -0.02
LDB3-207ENST00000542786 C17orf102A2RUQ5 167 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 PIRO00625 290 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 GABBR2O75899 941 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 KRT10P13645 584 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 PSMA2P25787 234 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 KLRC2P26717 231 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 SSR1P43307 286 aaKnown RBP14.94□□□□□ -0.02
LDB3-207ENST00000542786 CRYBB1P53674 252 aaPredicted RBP14.94□□□□□ -0.02
LDB3-207ENST00000542786 PMS2P54278 862 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 MYO1EQ12965 1108 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 PPP1R7Q15435 360 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms