RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 LRRC27Q9C0I9 530 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 ATP6V0A4Q9HBG4 840 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 ETAA1Q9NY74 926 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 VSX1Q9NZR4 365 aaPredicted RBP3.97□□□□□ -1.77
USP28-210ENST00000542033 OGDHLQ9ULD0 1010 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 DMRT1Q9Y5R6 373 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 A0A0B4J269 797 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 GRID2IPA4D2P6 1211 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 ISM1B1AKI9 464 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 BTN3A1O00481 513 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 FRS3O43559 492 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 TRIAP1O43715 76 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 DNAJB5O75953 348 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 ZFPL1O95159 310 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 LDHAP00338 332 aaKnown RBP3.96□□□□□ -1.78
USP28-210ENST00000542033 EGR2P11161 476 aaPredicted RBP3.96□□□□□ -1.78
USP28-210ENST00000542033 TRIM27P14373 513 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 KRT4P19013 534 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 PEX2P28328 305 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 NDUFV1P49821 464 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 INHBEP58166 350 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 SLC13A2Q13183 592 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 TUBB3Q13509 450 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 RAB32Q13637 225 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 HLXQ14774 488 aaPredicted RBP3.96□□□□□ -1.78
USP28-210ENST00000542033 IQCB1Q15051 598 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 ERCC6LQ2NKX8 1250 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 APOA5Q6Q788 366 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 TSHZ1Q6ZSZ6 1077 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 MPP5Q8N3R9 675 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 DNAJC5GQ8N7S2 189 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 ANKS1AQ92625 1134 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 FUBP1Q96AE4 644 aaKnown RBP3.96□□□□□ -1.78
USP28-210ENST00000542033 SLC39A13Q96H72 371 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 LRIG1Q96JA1 1093 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 SLC46A1Q96NT5 459 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 TRIM54Q9BYV2 358 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 TTYH3Q9C0H2 523 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 BHMT2Q9H2M3 363 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 SMOC2Q9H3U7 446 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 KIAA1586Q9HCI6 787 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 MRPS18AQ9NVS2 196 aaKnown RBP3.96□□□□□ -1.78
USP28-210ENST00000542033 XPR1Q9UBH6 696 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 HESX1Q9UBX0 185 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 PAXBP1Q9Y5B6 917 aa3.96□□□□□ -1.78
USP28-210ENST00000542033 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.96□□□□□ -1.78
USP28-210ENST00000542033 TBX3O15119 743 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 SUV39H1O43463 412 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 CREB3O43889 395 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 NBPF7P0C2Y1 421 aaPredicted RBP3.95□□□□□ -1.78
USP28-210ENST00000542033 ATXN1LP0C7T5 689 aaKnown RBP3.95□□□□□ -1.78
USP28-210ENST00000542033 XRCC6P12956 609 aaKnown RBP eCLIP3.95□□□□□ -1.78
USP28-210ENST00000542033 ZKSCAN1P17029 563 aaPredicted RBP3.95□□□□□ -1.78
USP28-210ENST00000542033 EN2P19622 333 aaPredicted RBP3.95□□□□□ -1.78
USP28-210ENST00000542033 VIPR2P41587 438 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 GCLCP48506 637 aaPredicted RBP3.95□□□□□ -1.78
USP28-210ENST00000542033 SLC11A2P49281 568 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 ARFIP2P53365 341 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 SUMO3P55854 103 aaPredicted RBP3.95□□□□□ -1.78
USP28-210ENST00000542033 UCP3P55916 312 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 MPP3Q13368 585 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 CNGA2Q16280 664 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 SLC44A3Q8N4M1 653 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 SLC15A4Q8N697 577 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 BEND2Q8NDZ0 799 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 SSH3Q8TE77 659 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 LINC00476Q8WZB0 136 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 APIPQ96GX9 242 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 Q96MF0 132 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 SPATA5L1Q9BVQ7 753 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 SARGQ9BW04 601 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 NUP62CLQ9H1M0 184 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 ZNF287Q9HBT7 754 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 SACM1LQ9NTJ5 587 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 ZSCAN32Q9NX65 697 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 CPNE7Q9UBL6 633 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 AFF4Q9UHB7 1163 aaKnown RBP3.95□□□□□ -1.78
USP28-210ENST00000542033 FAM50BQ9Y247 325 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 PCDHGB6Q9Y5F9 930 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 USP19O94966 1318 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 SPATA31A3Q5VYP0 1347 aa3.95□□□□□ -1.78
USP28-210ENST00000542033 ANO9A1A5B4 782 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 MYO1FO00160 1098 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 PEX1O43933 1283 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 PQBP1O60828 265 aaKnown RBP3.94□□□□□ -1.78
USP28-210ENST00000542033 PPFIA2O75334 1257 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 CYP2C9P11712 490 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 MYF5P13349 255 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 PHKG2P15735 406 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 GATA3P23771 443 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 CD6P30203 668 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 PXNP49023 591 aaPredicted RBP3.94□□□□□ -1.78
USP28-210ENST00000542033 LOXL3P58215 753 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 SCAPQ12770 1279 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 CTBP1Q13363 440 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 PICALMQ13492 652 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 SEMA5AQ13591 1074 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 GALEQ14376 348 aa3.94□□□□□ -1.78
USP28-210ENST00000542033 SF3B3Q15393 1217 aaKnown RBP3.94□□□□□ -1.78
USP28-210ENST00000542033 SMN1Q16637 294 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms