RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MAFGO15525 162 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 SMIM24O75264 130 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 CASP2P42575 452 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 C1orf146Q5VVC0 180 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 ZNF662Q6ZS27 426 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 MYLK4Q86YV6 388 aaPredicted RBP16.86■□□□□ 0.29
VARS2-212ENST00000542001 USH1CQ9Y6N9 552 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 GOLGA8CPA6NN73 597 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 RFC1P35251 1148 aaPredicted RBP16.86■□□□□ 0.29
VARS2-212ENST00000542001 ZNF200P98182 395 aaPredicted RBP16.86■□□□□ 0.29
VARS2-212ENST00000542001 SPIRE1Q08AE8 756 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 TFDP3Q5H9I0 405 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 SH2D4BQ5SQS7 431 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 SCUBE3Q8IX30 993 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 B4GALT5O43286 388 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 ZNF862O60290 1169 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 SKOR1P84550 965 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 C15orf59Q2T9L4 293 aaPredicted RBP16.86■□□□□ 0.29
VARS2-212ENST00000542001 DUPD1Q68J44 220 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 FAM83AQ86UY5 434 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 RXFP2Q8WXD0 754 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 SERPINB12Q96P63 405 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 SMARCAD1Q9H4L7 1026 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 O00370 1275 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 GLRA2P23416 452 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 NAMPTP43490 491 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 GTF2BQ00403 316 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 RNASELQ05823 741 aaKnown RBP16.86■□□□□ 0.29
VARS2-212ENST00000542001 AUHQ13825 339 aaKnown RBP16.86■□□□□ 0.29
VARS2-212ENST00000542001 TMEM132BQ14DG7 1078 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 TMCO4Q5TGY1 634 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 IER5Q5VY09 327 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 PDZD4Q76G19 769 aaPredicted RBP16.86■□□□□ 0.29
VARS2-212ENST00000542001 RSPH3Q86UC2 560 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 WDR75Q8IWA0 830 aaKnown RBP16.86■□□□□ 0.29
VARS2-212ENST00000542001 BEST2Q8NFU1 509 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 NSMCE1Q8WV22 266 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 CCT6BQ92526 530 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 RMDN2Q96LZ7 410 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 NT5C1AQ9BXI3 368 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 OSBPL1AQ9BXW6 950 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 VCXQ9H320 206 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 SSX2IPQ9Y2D8 614 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 AFG3L2Q9Y4W6 797 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 PCDHA2Q9Y5H9 948 aa16.86■□□□□ 0.29
VARS2-212ENST00000542001 PIK3CDO00329 1044 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 BNIP3LO60238 219 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 GARSP41250 739 aaKnown RBP16.85■□□□□ 0.29
VARS2-212ENST00000542001 ABCG1P45844 678 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 HABP4Q5JVS0 413 aaKnown RBP16.85■□□□□ 0.29
VARS2-212ENST00000542001 CES3Q6UWW8 571 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 NPNTQ6UXI9 565 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 AFG1LQ8WV93 481 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 PFDN4Q9NQP4 134 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 ZFATQ9P243 1243 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 TIMM13Q9Y5L4 95 aaPredicted RBP16.85■□□□□ 0.29
VARS2-212ENST00000542001 SCN11AQ9UI33 1791 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 STAG3L1P0CL83 205 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 ABCD1P33897 745 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 ROPN1BQ9BZX4 212 aaPredicted RBP16.85■□□□□ 0.29
VARS2-212ENST00000542001 ROPN1Q9HAT0 212 aaPredicted RBP16.85■□□□□ 0.29
VARS2-212ENST00000542001 PNMA3Q9UL41 463 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 RBAK-RBAKDNI3L0D1 243 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 CBX6O95503 412 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 CYP2C8P10632 490 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 RBP5P82980 135 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 ANKRD20A8PQ5CZ79 823 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 PIP4K2CQ8TBX8 421 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 PPWD1Q96BP3 646 aaKnown RBP16.85■□□□□ 0.29
VARS2-212ENST00000542001 SGF29Q96ES7 293 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 CGRRF1Q99675 332 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 UBP1Q9NZI7 540 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 HEY2Q9UBP5 337 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 UBIAD1Q9Y5Z9 338 aa16.85■□□□□ 0.29
VARS2-212ENST00000542001 XPOTO43592 962 aaKnown RBP16.84■□□□□ 0.29
VARS2-212ENST00000542001 PTPRAP18433 802 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 CYP2B6P20813 491 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 DSG3P32926 999 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 PPP1R2P3Q6NXS1 205 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 HDAC11Q96DB2 347 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 THTPAQ9BU02 230 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 CST3P01034 146 aaPredicted RBP16.84■□□□□ 0.29
VARS2-212ENST00000542001 INSRRP14616 1297 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 AKAP5P24588 427 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 FOXD4Q12950 439 aaPredicted RBP16.84■□□□□ 0.29
VARS2-212ENST00000542001 MMRN1Q13201 1228 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 COBLL1Q53SF7 1204 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 DENND1BQ6P3S1 775 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 BTNL9Q6UXG8 535 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 ARMCX2Q7L311 632 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 MTDHQ86UE4 582 aaKnown RBP16.84■□□□□ 0.29
VARS2-212ENST00000542001 ADAM32Q8TC27 787 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 PAFAH2Q99487 392 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 GIPC1O14908 333 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 DDX3YO15523 660 aaKnown RBP16.84■□□□□ 0.29
VARS2-212ENST00000542001 NR1H3Q13133 447 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 HACE1Q8IYU2 909 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 OR6J1Q8NGC5 347 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 SPDL1Q96EA4 605 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 STAMBPL1Q96FJ0 436 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms