RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SMCO2A6NFE2 343 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 CCDC69A6NI79 296 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 F8W810 466 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 MAFO75444 373 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-214ENST00000540865 PAGE1O75459 146 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 TADA2AO75478 443 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 AKAP3O75969 853 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 DLGAP3O95886 979 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 CTSBP07858 339 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 CELA3AP09093 270 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 CEACAM1P13688 526 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 FCARP24071 287 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 AXLP30530 894 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 SFNP31947 248 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 CIITAP33076 1130 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 MLH1P40692 756 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 LIFRP42702 1097 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 SCNN1GP51170 649 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 JAK3P52333 1124 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 HDAC1Q13547 482 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-214ENST00000540865 RAB33AQ14088 237 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 LRP8Q14114 963 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 UGCGQ16739 394 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 MTERF2Q49AM1 385 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 SOWAHCQ53LP3 525 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-214ENST00000540865 RPS26P11Q5JNZ5 115 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-214ENST00000540865 DGKKQ5KSL6 1271 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 RTP2Q5QGT7 225 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 AXDND1Q5T1B0 1012 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-214ENST00000540865 DAB2IPQ5VWQ8 1189 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 RNF43Q68DV7 783 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 CASC1Q6TDU7 716 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 IGF2-ASQ6U949 168 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 PRSS55Q6UWB4 352 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-214ENST00000540865 ACAD11Q709F0 780 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 SRGAP1Q7Z6B7 1085 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 FANCBQ8NB91 859 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 SMG8Q8ND04 991 aaKnown RBP5.12□□□□□ -1.59
SNHG1-214ENST00000540865 RDM1Q8NG50 284 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 LNX1Q8TBB1 728 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-214ENST00000540865 SLC7A14Q8TBB6 771 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 DEPDC1BQ8WUY9 529 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 GAB3Q8WWW8 586 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 ING5Q8WYH8 240 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 TMEM87BQ96K49 555 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 NLRP4Q96MN2 994 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 GAD1Q99259 594 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 TTPALQ9BTX7 342 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 SCNM1Q9BWG6 230 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 ZFP14Q9HCL3 533 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 ZNF334Q9HCZ1 680 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-214ENST00000540865 SRA1Q9HD15 236 aaKnown RBP5.12□□□□□ -1.59
SNHG1-214ENST00000540865 MIOSQ9NXC5 875 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 BARHL2Q9NY43 387 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 ANKFY1Q9P2R3 1169 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 NEUROG3Q9Y4Z2 214 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 IPPQ9Y573 584 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 UNC79Q9P2D8 2635 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 SF3B1O75533 1304 aaKnown RBP eCLIP5.12□□□□□ -1.592e-7■■■■□ 22.6
SNHG1-214ENST00000540865 KALRNO60229 2985 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 COL4A3Q01955 1670 aa5.12□□□□□ -1.59
SNHG1-214ENST00000540865 C2orf16Q68DN1 1984 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 CELSR3Q9NYQ7 3312 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 SH2B2O14492 632 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-214ENST00000540865 ENC1O14682 589 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 ZNF197O14709 1029 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 PRC1O43663 620 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 STBD1O95210 358 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 RHOP08100 348 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 PSMC3P17980 439 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 RXRAP19793 462 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 SPINK2P20155 84 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 CSRP1P21291 193 aaKnown RBP5.11□□□□□ -1.59
SNHG1-214ENST00000540865 CCNE1P24864 410 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 MAOBP27338 520 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 GDI1P31150 447 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 MCM5P33992 734 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 MPLP40238 635 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 RBM25P49756 843 aaKnown RBP5.11□□□□□ -1.59
SNHG1-214ENST00000540865 SPIRE1Q08AE8 756 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 NCBP1Q09161 790 aaKnown RBP5.11□□□□□ -1.59
SNHG1-214ENST00000540865 ELAVL2Q12926 359 aaKnown RBP5.11□□□□□ -1.59
SNHG1-214ENST00000540865 HSP90AA2PQ14568 343 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-214ENST00000540865 PCBP1Q15365 356 aaKnown RBP eCLIP5.11□□□□□ -1.59
SNHG1-214ENST00000540865 CCDC6Q16204 474 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 PSMD5Q16401 504 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 DUOXA2Q1HG44 320 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 SLC5A9Q2M3M2 681 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 PRR16Q569H4 304 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 FAM78AQ5JUQ0 283 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 JAKMIP3Q5VZ66 844 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 HEATR6Q6AI08 1181 aaKnown RBP5.11□□□□□ -1.59
SNHG1-214ENST00000540865 KBTBD6Q86V97 674 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 KSR1Q8IVT5 923 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 EXOC8Q8IYI6 725 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 HACE1Q8IYU2 909 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 SYNPOQ8N3V7 929 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 ZC3H10Q96K80 434 aaKnown RBP5.11□□□□□ -1.59
SNHG1-214ENST00000540865 RIT2Q99578 217 aa5.11□□□□□ -1.59
SNHG1-214ENST00000540865 EDEM2Q9BV94 578 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms