RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PABPC3Q9H361 631 aaKnown RBP10.5□□□□□ -0.73
TRAF1-202ENST00000540010 NOD2Q9HC29 1040 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 VCX3AQ9NNX9 186 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 PDGFCQ9NRA1 345 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 ARHGAP28Q9P2N2 729 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 SLC4A7Q9Y6M7 1214 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 MYH11P35749 1972 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 ADORA2AP29274 412 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 EFNA5P52803 228 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 TAF12Q16514 161 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 NLRP7Q8WX94 980 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 TUBB6Q9BUF5 446 aa10.5□□□□□ -0.73
TRAF1-202ENST00000540010 MRPL4Q9BYD3 311 aaKnown RBP10.5□□□□□ -0.73
TRAF1-202ENST00000540010 SPECC1L-ADORA2AF8WAN1 911 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 PIK3R2O00459 728 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 STBD1O95210 358 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 TMEM253P0C7T8 217 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 NLRP11P59045 1033 aaKnown RBP10.49□□□□□ -0.73
TRAF1-202ENST00000540010 ZNF667Q5HYK9 610 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 ATG16L1Q676U5 607 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 SPOPLQ6IQ16 392 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 ARMC2Q8NEN0 867 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 PLEKHO2Q8TD55 490 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 ATP8B4Q8TF62 1192 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 NIFKQ9BYG3 293 aaKnown RBP10.49□□□□□ -0.73
TRAF1-202ENST00000540010 CARD9Q9H257 536 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 VPS11Q9H270 941 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 UBN1Q9NPG3 1134 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 ANGPTL2Q9UKU9 493 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 PPFIA2O75334 1257 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 ATG7O95352 703 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 EDNRBP24530 442 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 ARL4AP40617 200 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 NR1H3Q13133 447 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 MXD4Q14582 209 aaPredicted RBP10.49□□□□□ -0.73
TRAF1-202ENST00000540010 GJC2Q5T442 439 aaPredicted RBP10.49□□□□□ -0.73
TRAF1-202ENST00000540010 GABPB2Q8TAK5 448 aaPredicted RBP10.49□□□□□ -0.73
TRAF1-202ENST00000540010 HDAC11Q96DB2 347 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 GPR20Q99678 358 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 ANLNQ9NQW6 1124 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 TLK1Q9UKI8 766 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 FNDC3AQ9Y2H6 1198 aaKnown RBP10.49□□□□□ -0.73
TRAF1-202ENST00000540010 KIAA0391O15091 583 aaKnown RBP10.49□□□□□ -0.73
TRAF1-202ENST00000540010 SGPL1O95470 568 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 PRKCBP05771 671 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 ITGA8P53708 1063 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 PSMC1P62191 440 aaKnown RBP10.49□□□□□ -0.73
TRAF1-202ENST00000540010 STAT4Q14765 748 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 SLC39A4Q6P5W5 647 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 LNX1Q8TBB1 728 aaPredicted RBP10.49□□□□□ -0.73
TRAF1-202ENST00000540010 SEMA4AQ9H3S1 761 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 ADCY3O60266 1144 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 GJA5P36382 358 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 CAPSQ13938 189 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 HIF1AQ16665 826 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 GPAT2Q6NUI2 795 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 SEMA4DQ92854 862 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 TTC25Q96NG3 672 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 RRAGCQ9HB90 399 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 TMBIM4Q9HC24 238 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 APOBEC2Q9Y235 224 aaKnown RBP10.49□□□□□ -0.73
TRAF1-202ENST00000540010 NEU2Q9Y3R4 380 aa10.49□□□□□ -0.73
TRAF1-202ENST00000540010 COL11A1P12107 1806 aaPredicted RBP10.48□□□□□ -0.73
TRAF1-202ENST00000540010 BTBD19C9JJ37 291 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 MED7O43513 233 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 MAFO75444 373 aaPredicted RBP10.48□□□□□ -0.73
TRAF1-202ENST00000540010 KRT38O76015 456 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 SYF2O95926 243 aaKnown RBP10.48□□□□□ -0.73
TRAF1-202ENST00000540010 HLA-DRAP01903 254 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 SCTRP47872 440 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 CLCN3P51790 818 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 LAMTOR4Q0VGL1 99 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 ART3Q13508 389 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 RABGAP1LQ5R372 815 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 EFCAB12Q6NXP0 572 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 NUDCD3Q8IVD9 361 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 SLC26A7Q8TE54 656 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 TATDN2Q93075 761 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 PCYT2Q99447 389 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 C2orf40Q9H1Z8 148 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 ERAP1Q9NZ08 941 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 HBP1O60381 514 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 GH1P01241 217 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 ITIH2P19823 946 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 GTF2H1P32780 548 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 ARL2P36404 184 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 CPA2P48052 419 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 LDLRAD1Q5T700 205 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 KRT80Q6KB66 452 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 RGS9BPQ6ZS82 235 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 ATP11CQ8NB49 1132 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 PDZD8Q8NEN9 1154 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 DHX38Q92620 1227 aaKnown RBP10.48□□□□□ -0.73
TRAF1-202ENST00000540010 ACSF2Q96CM8 615 aaPredicted RBP10.48□□□□□ -0.73
TRAF1-202ENST00000540010 ATXN7L3BQ96GX2 97 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 MFSD14AQ96MC6 490 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 PARK7Q99497 189 aaKnown RBP10.48□□□□□ -0.73
TRAF1-202ENST00000540010 OSBPL8Q9BZF1 889 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 NOD1Q9Y239 953 aa10.48□□□□□ -0.73
TRAF1-202ENST00000540010 FAM47DPA6NHR8 397 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms