RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 PPP1R26Q5T8A7 1209 aaPredicted RBP16.04■□□□□ 0.16
PXN-208ENST00000538144 DCLRE1AQ6PJP8 1040 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 CD300LGQ6UXG3 332 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 MMS22LQ6ZRQ5 1243 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 MON1BQ7L1V2 547 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 COLGALT2Q8IYK4 626 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 CRIPAKQ8N1N5 446 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 TPCN2Q8NHX9 752 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 CASD1Q96PB1 797 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 FAM49BQ9NUQ9 324 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 ADAM22Q9P0K1 906 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 DNAJB4Q9UDY4 337 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 GTF3C4Q9UKN8 822 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 RAB21Q9UL25 225 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.04■□□□□ 0.16
PXN-208ENST00000538144 CEP83Q9Y592 693 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 PCDHGC5Q9Y5F6 944 aa16.04■□□□□ 0.16
PXN-208ENST00000538144 FNDC1Q4ZHG4 1894 aaPredicted RBP16.04■□□□□ 0.16
PXN-208ENST00000538144 ATP8B1O43520 1251 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 UPP2O95045 317 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 KIF4AO95239 1232 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 LSM8O95777 96 aaKnown RBP16.03■□□□□ 0.16
PXN-208ENST00000538144 ATP1A1P05023 1023 aaKnown RBP16.03■□□□□ 0.16
PXN-208ENST00000538144 CYP1A2P05177 515 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 CDH5P33151 784 aaPredicted RBP16.03■□□□□ 0.16
PXN-208ENST00000538144 OR1G1P47890 313 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 AARSP49588 968 aaKnown RBP eCLIP16.03■□□□□ 0.16
PXN-208ENST00000538144 LLGL2Q6P1M3 1020 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 PHF13Q86YI8 300 aaPredicted RBP16.03■□□□□ 0.16
PXN-208ENST00000538144 RHOT2Q8IXI1 618 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 UBA3Q8TBC4 463 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 ZNF518BQ9C0D4 1074 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 LHX5Q9H2C1 402 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 GOLPH3Q9H4A6 298 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 ANKZF1Q9H8Y5 726 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 TSPAN16Q9UKR8 245 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 M0QYV0 167 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 RRM1P23921 792 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 ACAT1P24752 427 aaKnown RBP16.03■□□□□ 0.16
PXN-208ENST00000538144 NPAS4Q8IUM7 802 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 CRYBG2Q8N1P7 616 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 NUP85Q9BW27 656 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 PARD6BQ9BYG5 372 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 CYTH4Q9UIA0 394 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 JRKLQ9Y4A0 524 aa16.03■□□□□ 0.16
PXN-208ENST00000538144 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 TBKBP1A7MCY6 615 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 GABRDO14764 452 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 ATP2C2O75185 946 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 FTCDO95954 541 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 FAM163BP0C2L3 166 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 MMP8P22894 467 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 PSMC1P62191 440 aaKnown RBP16.02■□□□□ 0.16
PXN-208ENST00000538144 PTP4A2Q12974 167 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 GOLGA7BQ2TAP0 167 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 PPP1R2P3Q6NXS1 205 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 LCLAT1Q6UWP7 414 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 ERICH1Q86X53 443 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 TMEM86AQ8N2M4 240 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 TRIM11Q96F44 468 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 EPC1Q9H2F5 836 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 NRDE2Q9H7Z3 1164 aa16.02■□□□□ 0.16
PXN-208ENST00000538144 DDX43Q9NXZ2 648 aaKnown RBP16.02■□□□□ 0.16
PXN-208ENST00000538144 PRG3Q9Y2Y8 225 aaPredicted RBP16.02■□□□□ 0.16
PXN-208ENST00000538144 HOXA2O43364 376 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 NCK2O43639 380 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 MYBL1P10243 752 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 ODC1P11926 461 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 CCDC130P13994 396 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 GPD2P43304 727 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 CDR1P51861 262 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
PXN-208ENST00000538144 BRD3Q15059 726 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 PTPROQ16827 1216 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 LIN9Q5TKA1 542 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 MFSD5Q6N075 450 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 CC2D1AQ6P1N0 951 aaPredicted RBP16.01■□□□□ 0.15
PXN-208ENST00000538144 UBE2Q1Q7Z7E8 422 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 DAAM2Q86T65 1068 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 RSPH1Q8WYR4 309 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 VCPIP1Q96JH7 1222 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 TNIP3Q96KP6 325 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 HCSTQ9UBK5 93 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 ALPK3Q96L96 1907 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 TSC2P49815 1807 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 CTAGE15A4D2H0 777 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 BUB1BO60566 1050 aaPredicted RBP16.01■□□□□ 0.15
PXN-208ENST00000538144 CTAGE8P0CG41 777 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 ACRP10323 421 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 ADORA2BP29275 332 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 LHX1P48742 406 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 CBX1P83916 185 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 TCEAL1Q15170 157 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 STILQ15468 1287 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 CCDC142Q17RM4 750 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 TMCO3Q6UWJ1 677 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 ZNF572Q7Z3I7 529 aaPredicted RBP16.01■□□□□ 0.15
PXN-208ENST00000538144 CTAGE6Q86UF2 777 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 CTAGE4Q8IX94 777 aa16.01■□□□□ 0.15
PXN-208ENST00000538144 TMEM199Q8N511 208 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms