RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 AP4S1Q9Y587 144 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 H0YJX3 145 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 AIM2O14862 343 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 AKAP10O43572 662 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 SPAG6O75602 509 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 UQCRBP14927 111 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 UCHL3P15374 230 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 CYP1B1Q16678 543 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 KIF19Q2TAC6 998 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 KYAT3Q6YP21 454 aaKnown RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 C3orf62Q6ZUJ4 267 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ATG9AQ7Z3C6 839 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 NT5DC3Q86UY8 548 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 AHI1Q8N157 1196 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 C7orf43Q8WVR3 580 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 TEKT3Q9BXF9 490 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ATF5Q9Y2D1 282 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 PCDHA1Q9Y5I3 950 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 FER1L4A9Z1Z3 1794 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 SPDYE5A6NIY4 337 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 FAM196BA6NMK8 535 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 P4HA2O15460 535 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF862O60290 1169 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L8P0C7I0 530 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 GYS1P13807 737 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ADRA2BP18089 450 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 COMTP21964 271 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 STAT3P40763 770 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 POU5F1Q01860 360 aaKnown RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 SCARF1Q14162 830 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 AOC3Q16853 763 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ECHDC2Q86YB7 292 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 UBE2OQ9C0C9 1292 aaKnown RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 C1orf21Q9H246 121 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 C17orf75Q9HAS0 396 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 GTSE1Q9NYZ3 720 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 TUBGCP4Q9UGJ1 667 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ASAP1Q9ULH1 1129 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 RAB26Q9ULW5 256 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 MYH7P12883 1935 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 KRT36O76013 467 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 SSTR3P32745 418 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 BTDP43251 543 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 PLOD1Q02809 727 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 LRRC8BQ6P9F7 803 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 CLEC4GQ6UXB4 293 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 EXOC8Q8IYI6 725 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 SPATA17Q96L03 361 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 KIFC3Q9BVG8 833 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 GRIP2Q9C0E4 1043 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 CDC42EP4Q9H3Q1 356 aaKnown RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 CROTQ9UKG9 612 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ROBO3Q96MS0 1386 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 E2F8A0AVK6 867 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 SH3PXD2BA1X283 911 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ENO3P13929 434 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ACTR3P61158 418 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 PPIDQ08752 370 aaKnown RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 SPRED3Q2MJR0 410 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 KCTD1Q719H9 257 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 LRRC6Q86X45 466 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 KCNK16Q96T55 309 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 CD209Q9NNX6 404 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 C8orf4Q9NR00 106 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 BAG5Q9UL15 447 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 PIK3CDO00329 1044 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 HNRNPDLO14979 420 aaKnown RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 DLGAP3O95886 979 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ZBED1O96006 694 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 OATP04181 439 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 SHBGP04278 402 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 VDRP11473 427 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 MAP3K10Q02779 954 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 PTK7Q13308 1070 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 PDAP1Q13442 181 aaKnown RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 KNOP1Q1ED39 458 aaKnown RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF786Q8N393 782 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 EXT2Q93063 718 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 DACH2Q96NX9 599 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 SEC31BQ9NQW1 1179 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 A0A087X0T9 212 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 TDP2O95551 362 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 FAM228BP0C875 321 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 OCM2P0CE71 109 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 OCMP0CE72 109 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 HMOX2P30519 316 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 SERPINB1P30740 379 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 BRDTQ58F21 947 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 HABP4Q5JVS0 413 aaKnown RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 PLEKHA7Q6IQ23 1121 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 ARID3BQ8IVW6 561 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 SIX5Q8N196 739 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 CCNYL1Q8N7R7 359 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 BORCS5Q969J3 196 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 MRPL1Q9BYD6 325 aaKnown RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 FRMD8Q9BZ67 464 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-213ENST00000537002 DAPK2Q9UIK4 370 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 A6NJR5 290 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 MYL2P10916 166 aa5.63□□□□□ -1.51
PTPRD-213ENST00000537002 POLR2BP30876 1174 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms