RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 BICD1Q96G01 975 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 PLEKHG4BQ96PX9 1271 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 ZNF577Q9BSK1 485 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 CELF4Q9BZC1 486 aaKnown RBP12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 NEUROG2Q9H2A3 272 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 CDHR5Q9HBB8 845 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 ZNF302Q9NR11 478 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 SEL1LQ9UBV2 794 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 ATP8A1Q9Y2Q0 1164 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 C15orf41Q9Y2V0 281 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 ANKRD62A6NC57 917 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 HBP1O60381 514 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 PHF2O75151 1096 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 TNFAIP3P21580 790 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 MUTP22033 750 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 TMOD1P28289 359 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 CTNNB1P35222 781 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 MMP13P45452 471 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 MYBPC2Q14324 1141 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 PTPROQ16827 1216 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 C11orf63Q6NUN7 778 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 SFR1Q86XK3 245 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 KIAA0319LQ8IZA0 1049 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 ATP8B4Q8TF62 1192 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 SLC35C1Q96A29 364 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 ZNF689Q96CS4 500 aaPredicted RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 TSC22D3Q99576 134 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 POLR3CQ9BUI4 534 aaPredicted RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 DPH5Q9H2P9 285 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 RC3H2Q9HBD1 1191 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 SIX2Q9NPC8 291 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 PADI3Q9ULW8 664 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 NLRC5Q86WI3 1866 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 ADGRA3Q8IWK6 1321 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 EVPLQ92817 2033 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 ZBTB42B2RXF5 422 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 M0QZ92 97 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 DDX3YO15523 660 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 EYA4O95677 639 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 RPLP2P05387 115 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 MMEP08473 750 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 KCNA5P22460 613 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 BMPR1AP36894 532 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 SLC26A2P50443 739 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 KRT76Q01546 638 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 CETN1Q12798 172 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 MAPK7Q13164 816 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 TMED1Q13445 227 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 BTG3Q14201 252 aaPredicted RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 PRR16Q569H4 304 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 ARSHQ5FYA8 562 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 TCEAL5Q5H9L2 206 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 ZNF484Q5JVG2 852 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 SEL1L2Q5TEA6 688 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 HS2ST1Q7LGA3 356 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 TRMT1LQ7Z2T5 733 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 FAM186BQ8IYM0 893 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 NME8Q8N427 588 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 CCDC63Q8NA47 563 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 SLC35G2Q8TBE7 412 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 CCDC97Q96F63 343 aaPredicted RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 RPS6KC1Q96S38 1066 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 IQCGQ9H095 443 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 PRDM16Q9HAZ2 1276 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 INTS9Q9NV88 658 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 NOP53Q9NZM5 478 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 CNOT8Q9UFF9 292 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 SQORQ9Y6N5 450 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 COL4A6Q14031 1691 aa12.29□□□□□ -0.44
CHRNB1-202ENST00000536404 IGSF9BQ9UPX0 1349 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 GRM6O15303 877 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 MED24O75448 989 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 DGKIO75912 1065 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 AKAP3O75969 853 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 ITGA4P13612 1032 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 IBSPP21815 317 aaPredicted RBP12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 CIITAP33076 1130 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 GATMP50440 423 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 PDE6CP51160 858 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 ZNF131P52739 623 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 CUL3Q13618 768 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 BLMHQ13867 455 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 QPCTQ16769 361 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 LEXMQ3ZCV2 418 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 ZNF746Q6NUN9 644 aaPredicted RBP12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 PIGWQ7Z7B1 504 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 JAMLQ86YT9 394 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 CRIPAKQ8N1N5 446 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 GALNT15Q8N3T1 639 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 LENG9Q96B70 501 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 TSPAN18Q96SJ8 248 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 PPP1R16BQ96T49 567 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 SELENOSQ9BQE4 189 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 REEP2Q9BRK0 252 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 PLVAPQ9BX97 442 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 FGFBP2Q9BYJ0 223 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 PAPOLBQ9NRJ5 636 aaKnown RBP12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 TBC1D22BQ9NU19 505 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 ZDHHC18Q9NUE0 388 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms