RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 FAM170AA1A519 330 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 H7C4K7 107 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 DDX3XO00571 662 aaKnown RBP eCLIP12.24□□□□□ -0.454e-11■□□□□ 9.3
CDCA3-206ENST00000536241 NRDCO43847 1150 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 AKR1B10O60218 316 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 OR4Q2P0C623 313 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 FAM228BP0C875 321 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 FMO1Q01740 532 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 CDR2Q01850 454 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 GFPT1Q06210 699 aaPredicted RBP12.24□□□□□ -0.45
CDCA3-206ENST00000536241 MDH1BQ5I0G3 518 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 FAM171BQ6P995 826 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 RSPO2Q6UXX9 243 aaPredicted RBP12.24□□□□□ -0.45
CDCA3-206ENST00000536241 ANKS3Q6ZW76 656 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 ZNF677Q86XU0 584 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 SLC30A5Q8TAD4 765 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 OLIG1Q8TAK6 271 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 TGS1Q96RS0 853 aaKnown RBP12.24□□□□□ -0.45
CDCA3-206ENST00000536241 PLVAPQ9BX97 442 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 DNAI2Q9GZS0 605 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 PDCL3Q9H2J4 239 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 PRO3102Q9H379 93 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 CERS4Q9HA82 394 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 SPTLC3Q9NUV7 552 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 SEPT11Q9NVA2 429 aaKnown RBP12.24□□□□□ -0.45
CDCA3-206ENST00000536241 TMLHEQ9NVH6 421 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 KIAA1671Q9BY89 1806 aa12.24□□□□□ -0.45
CDCA3-206ENST00000536241 GBF1Q92538 1859 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 C5orf67F2Z3F1 127 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 CLDN5O00501 218 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 ARHGAP6O43182 974 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 MED7O43513 233 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 TBC1D4O60343 1298 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 RB1P06400 928 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 CCDC130P13994 396 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 RPL17P18621 184 aaKnown RBP12.23□□□□□ -0.45
CDCA3-206ENST00000536241 DNAJB2P25686 324 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 ADORA2BP29275 332 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 GLUD2P49448 558 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 KIF11P52732 1056 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 ARPP19P56211 112 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 ERVK-21P61565 698 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 TSPY1Q01534 308 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 DSG1Q02413 1049 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 BMS1Q14692 1282 aaKnown RBP12.23□□□□□ -0.45
CDCA3-206ENST00000536241 INTS6LQ5JSJ4 861 aaKnown RBP12.23□□□□□ -0.45
CDCA3-206ENST00000536241 ZNF280DQ6N043 979 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 PAQR9Q6ZVX9 377 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 VPS36Q86VN1 386 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 DNAAF5Q86Y56 855 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 PALB2Q86YC2 1186 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 CCDC170Q8IYT3 715 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 FBXO22Q8NEZ5 403 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 UBA3Q8TBC4 463 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 MYCBPAPQ8TBZ2 947 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 SPPL3Q8TCT6 385 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 AUTS2Q8WXX7 1259 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 PIK3R5Q8WYR1 880 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 TRIM44Q96DX7 344 aaPredicted RBP12.23□□□□□ -0.45
CDCA3-206ENST00000536241 PCED1BQ96HM7 432 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 HERC2P3Q9BVR0 1158 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 B3GNT5Q9BYG0 378 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDCA3-206ENST00000536241 PDE4DIPQ5VU43 2346 aa12.23□□□□□ -0.45
CDCA3-206ENST00000536241 OR6C75A6NL08 312 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 TMCO5BA8MYB1 307 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 O00370 1275 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 MICAL2O94851 1124 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 NDUFA10O95299 355 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 CXCL14O95715 111 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 DNAJB1P25685 340 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 CYLC1P35663 651 aaPredicted RBP12.22□□□□□ -0.45
CDCA3-206ENST00000536241 ERVFC1P60507 584 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 CYP27A1Q02318 531 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 RAB30Q15771 203 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 PSMD5Q16401 504 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 CCDC122Q5T0U0 273 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 ARHGAP17Q68EM7 881 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 DENND1BQ6P3S1 775 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 LCLAT1Q6UWP7 414 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 TMC7Q7Z402 723 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 PASD1Q8IV76 773 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 WDTC1Q8N5D0 677 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 SLC2A14Q8TDB8 520 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 POF1BQ8WVV4 589 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 SAMD11Q96NU1 681 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 PKMYT1Q99640 499 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 HNRNPABQ99729 332 aaKnown RBP12.22□□□□□ -0.45
CDCA3-206ENST00000536241 CLSTN3Q9BQT9 956 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 MED10Q9BTT4 135 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 ZCWPW1Q9H0M4 648 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 SLC28A3Q9HAS3 691 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 TAS2R14Q9NYV8 317 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 TSPAN16Q9UKR8 245 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 PCDHGC3Q9UN70 934 aa12.22□□□□□ -0.45
CDCA3-206ENST00000536241 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDCA3-206ENST00000536241 ZNF263O14978 683 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 GRM6O15303 877 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 ADAM12O43184 909 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 LILRB3O75022 631 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms