RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ZBTB34Q8NCN2 500 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 KBTBD7Q8WVZ9 684 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 LRTOMTQ8WZ04 291 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 KAT5Q92993 513 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 SCAMP4Q969E2 229 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 VRK1Q99986 396 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-202ENST00000535689 GPR87Q9BY21 358 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 MEGF9Q9H1U4 602 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 ARNT2Q9HBZ2 717 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 ANLNQ9NQW6 1124 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 EIF2B4Q9UI10 523 aaKnown RBP3.99□□□□□ -1.77
SNHG1-202ENST00000535689 OGDHLQ9ULD0 1010 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 SIK3Q9Y2K2 1263 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 TESMINQ9Y4I5 508 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 ACTL7AQ9Y615 435 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 COL18A1P39060 1754 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 SBF1O95248 1867 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 CCDC88AQ3V6T2 1871 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 LY75O60449 1722 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 ARFGEF1Q9Y6D6 1849 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 TNS2Q63HR2 1409 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 C10orf71Q711Q0 1435 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 MATN2O00339 956 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 TPP1O14773 563 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 MUSKO15146 869 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 GRM6O15303 877 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 AMY1AP04745 511 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 RARBP10826 455 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 RHCEP18577 417 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 PRDX5P30044 214 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 ALDH1A3P47895 512 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 RAP2BP61225 183 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 RHDQ02161 417 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 MAP2K1Q02750 393 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-202ENST00000535689 FOXL1Q12952 345 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 TARDBPQ13148 414 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNHG1-202ENST00000535689 SNAPC2Q13487 334 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 CNN3Q15417 329 aaKnown RBP3.98□□□□□ -1.77
SNHG1-202ENST00000535689 SPATS1Q496A3 300 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 CCDC93Q567U6 631 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 LMBRD2Q68DH5 695 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-202ENST00000535689 ZNF365Q70YC5 407 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 GPRIN1Q7Z2K8 1008 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 SYNE4Q8N205 404 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 SYT8Q8NBV8 401 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 OR2I1PQ8NGU4 316 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 GNRHR2Q96P88 292 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 PSMD1Q99460 953 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 MNTQ99583 582 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 SMOQ99835 787 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 CNPPD1Q9BV87 410 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 ZNF287Q9HBT7 754 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 PNPLA8Q9NP80 782 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 DDX21Q9NR30 783 aaKnown RBP eCLIP3.98□□□□□ -1.771e-323■■■□□ 15.6
SNHG1-202ENST00000535689 GABBR1Q9UBS5 961 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 PADI4Q9UM07 663 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 SH3BP1Q9Y3L3 701 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 PLEKHM1Q9Y4G2 1056 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 PAPPAQ13219 1627 aa3.98□□□□□ -1.77
SNHG1-202ENST00000535689 EVC2Q86UK5 1308 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 TNRC6CQ9HCJ0 1690 aaKnown RBP3.97□□□□□ -1.77
SNHG1-202ENST00000535689 PPIP5K1Q6PFW1 1433 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 ABCC6O95255 1503 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 GLTPD2A6NH11 291 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 E7ENX8 843 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 PRPF3O43395 683 aaKnown RBP3.97□□□□□ -1.77
SNHG1-202ENST00000535689 ALDH2P05091 517 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 ACO1P21399 889 aaKnown RBP3.97□□□□□ -1.77
SNHG1-202ENST00000535689 AK2P54819 239 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 TMF1P82094 1093 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 TAP2Q03519 686 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 DUSP8Q13202 625 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 PLS1Q14651 629 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 KIF22Q14807 665 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 FBLN7Q53RD9 439 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 MFSD14BQ5SR56 506 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 SFRP4Q6FHJ7 346 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-202ENST00000535689 MAMDC4Q6UXC1 1216 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 TTLL10Q6ZVT0 673 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 COLGALT2Q8IYK4 626 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 KRT78Q8N1N4 520 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 SH2D3CQ8N5H7 860 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 LILRA3Q8N6C8 439 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-202ENST00000535689 MB21D1Q8N884 522 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 REPS2Q8NFH8 660 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 DNERQ8NFT8 737 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 OR10H5Q8NGA6 315 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 OR52N2Q8NGI0 321 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 STON2Q8WXE9 905 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 TNPO1Q92973 898 aaKnown RBP3.97□□□□□ -1.77
SNHG1-202ENST00000535689 DVL3Q92997 716 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-202ENST00000535689 GCC1Q96CN9 775 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 APIPQ96GX9 242 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 STRBPQ96SI9 672 aaKnown RBP3.97□□□□□ -1.77
SNHG1-202ENST00000535689 ADOQ96SZ5 270 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 NELL2Q99435 816 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 MYD88Q99836 296 aa3.97□□□□□ -1.77
SNHG1-202ENST00000535689 NDC1Q9BTX1 674 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms