RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 SLITRK6Q9H5Y7 841 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 MMRN2Q9H8L6 949 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 CNOT10Q9H9A5 744 aaKnown RBP12.73□□□□□ -0.37
LINC01089-204ENST00000535643 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC01089-204ENST00000535643 AIPL1Q9NZN9 384 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 INTUQ9ULD6 942 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 DAAM1Q9Y4D1 1078 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 CAPN7Q9Y6W3 813 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 C2CD2LO14523 706 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 EIF3BP55884 814 aaKnown RBP12.72□□□□□ -0.37
LINC01089-204ENST00000535643 FKBP3Q00688 224 aaKnown RBP12.72□□□□□ -0.37
LINC01089-204ENST00000535643 CYP4F3Q08477 520 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 TMEM119Q4V9L6 283 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 ZCWPW2Q504Y3 356 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 LACTB2Q53H82 288 aaPredicted RBP12.72□□□□□ -0.37
LINC01089-204ENST00000535643 TAF1BQ53T94 588 aaPredicted RBP12.72□□□□□ -0.37
LINC01089-204ENST00000535643 C12orf60Q5U649 245 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 SLC30A10Q6XR72 485 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 SEPT14Q6ZU15 432 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 CMASQ8NFW8 434 aaPredicted RBP12.72□□□□□ -0.37
LINC01089-204ENST00000535643 GAB3Q8WWW8 586 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 CENPTQ96BT3 561 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 MTMR8Q96EF0 704 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 GDAP1L1Q96MZ0 367 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 PHF12Q96QT6 1004 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 CCT8L2Q96SF2 557 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 C16orf70Q9BSU1 422 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 EPB41L5Q9HCM4 733 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 SETD4Q9NVD3 440 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 HSPBP1Q9NZL4 362 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 TFR2Q9UP52 801 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 PCDHB7Q9Y5E2 793 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 COL4A3BPQ9Y5P4 624 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 TSC2P49815 1807 aa12.72□□□□□ -0.37
LINC01089-204ENST00000535643 KDM3AQ9Y4C1 1321 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 CYP2D7A0A087X1C5 515 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 A0A0A6YYK5 440 aaPredicted RBP12.71□□□□□ -0.37
LINC01089-204ENST00000535643 PP2D1A8MPX8 630 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 GCOM1H8Y6P7 765 aaPredicted RBP12.71□□□□□ -0.37
LINC01089-204ENST00000535643 RPP40O75818 363 aaKnown RBP12.71□□□□□ -0.37
LINC01089-204ENST00000535643 PAPSS2O95340 614 aaPredicted RBP12.71□□□□□ -0.37
LINC01089-204ENST00000535643 GLI1P08151 1106 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 PLEKP08567 350 aaPredicted RBP12.71□□□□□ -0.37
LINC01089-204ENST00000535643 MYZAPP0CAP1 466 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 CDK8P49336 464 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 ALDH7A1P49419 539 aaKnown RBP12.71□□□□□ -0.37
LINC01089-204ENST00000535643 USP11P51784 963 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 NPEPPSP55786 919 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 SNAP25P60880 206 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 GUCY2DQ02846 1103 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 TDRD12Q587J7 1177 aaKnown RBP12.71□□□□□ -0.37
LINC01089-204ENST00000535643 HYIQ5T013 277 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 CCDC121Q6ZUS5 278 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 PIP4P1Q86T03 277 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 FMNL3Q8IVF7 1028 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 LMBR1Q8WVP7 490 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 CASKIN2Q8WXE0 1202 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 RAD54LQ92698 747 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 GPKOWQ92917 476 aaPredicted RBP eCLIP12.71□□□□□ -0.37
LINC01089-204ENST00000535643 LIN37Q96GY3 246 aaPredicted RBP12.71□□□□□ -0.37
LINC01089-204ENST00000535643 CDK5RAP3Q96JB5 506 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 ZNF558Q96NG5 402 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 MMTAG2Q9BU76 263 aaKnown RBP12.71□□□□□ -0.37
LINC01089-204ENST00000535643 LMAN1LQ9HAT1 526 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 HEBP1Q9NRV9 189 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 BLOC1S4Q9NUP1 217 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 SPG21Q9NZD8 308 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 FBXL5Q9UKA1 691 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 NFU1Q9UMS0 254 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 IRAK3Q9Y616 596 aa12.71□□□□□ -0.37
LINC01089-204ENST00000535643 CCDC195A0A1B0GUA6 201 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 NFIBO00712 420 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 RASSF9O75901 435 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 CCDC172P0C7W6 258 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 C6P13671 934 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 SLC1A4P43007 532 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 CARSP49589 748 aaKnown RBP12.7□□□□□ -0.38
LINC01089-204ENST00000535643 SLC7A5Q01650 507 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 NEDD9Q14511 834 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 EDRF1Q3B7T1 1238 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 CCDC40Q4G0X9 1142 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 PREPLQ4J6C6 727 aaPredicted RBP12.7□□□□□ -0.38
LINC01089-204ENST00000535643 HEATR3Q7Z4Q2 680 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 LRRC15Q8TF66 581 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 SEC14L1Q92503 715 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 MTMR9Q96QG7 549 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 MPHOSPH6Q99547 160 aaKnown RBP12.7□□□□□ -0.38
LINC01089-204ENST00000535643 ZBP1Q9H171 429 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 FAM114A2Q9NRY5 505 aa12.7□□□□□ -0.38
LINC01089-204ENST00000535643 FAM207AQ9NSI2 230 aaPredicted RBP12.7□□□□□ -0.38
LINC01089-204ENST00000535643 UTP20O75691 2785 aaKnown RBP12.69□□□□□ -0.38
LINC01089-204ENST00000535643 SPENQ96T58 3664 aaKnown RBP12.69□□□□□ -0.38
LINC01089-204ENST00000535643 LRBAP50851 2863 aa12.69□□□□□ -0.38
LINC01089-204ENST00000535643 GMNCA6NCL1 334 aa12.69□□□□□ -0.38
LINC01089-204ENST00000535643 ERVH48-1M5A8F1 160 aa12.69□□□□□ -0.38
LINC01089-204ENST00000535643 EPHB6O15197 1021 aa12.69□□□□□ -0.38
LINC01089-204ENST00000535643 PALMO75781 387 aa12.69□□□□□ -0.38
LINC01089-204ENST00000535643 GSTA1P08263 222 aa12.69□□□□□ -0.38
LINC01089-204ENST00000535643 GCFC2P16383 781 aaKnown RBP12.69□□□□□ -0.38
LINC01089-204ENST00000535643 GBP1P32455 592 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms