RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 CHMP1BQ7LBR1 199 aa18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 TFB1MQ8WVM0 346 aaKnown RBP18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 ZMAT2Q96NC0 199 aaKnown RBP18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 WWOXQ9NZC7 414 aa18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 GGT7Q9UJ14 662 aa18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 ZNF609O15014 1411 aa18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 SOX11P35716 441 aa18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 MAGEA4P43358 317 aa18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 ADCK1Q86TW2 530 aa18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 SLC39A10Q9ULF5 831 aa18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 PRR23AA6NEV1 266 aa18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 RPS6P62753 249 aaKnown RBP18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 TNIP2Q8NFZ5 429 aa18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 RPRD1AQ96P16 312 aaPredicted RBP18.92■□□□□ 0.62
SFSWAP-203ENST00000535236 ERFP50548 548 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 PHKG1Q16816 387 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 TADA1Q96BN2 335 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 VPS33BQ9H267 617 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 TTLL13PA6NNM8 815 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 DCDC2CA8MYV0 355 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 UBXN8O00124 270 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 AIM2O14862 343 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 TCF3P15923 654 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 PTPN7P35236 360 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 MDH1P40925 334 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 VSNL1P62760 191 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 SLC9A5Q14940 896 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 ERAP2Q6P179 960 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 JAMLQ86YT9 394 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 PLD3Q8IV08 490 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 ENTPD7Q9NQZ7 604 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 ZNF229Q9UJW7 825 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 BLOC1S6Q9UL45 172 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 TBX20Q9UMR3 447 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 F5H5T6 163 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 GOLGA8TH3BQL2 631 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 M0QYT0 321 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 VWA5AO00534 786 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 EGFRP00533 1210 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 ASS1P00966 412 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 FXR2P51116 673 aaKnown RBP eCLIP18.91■□□□□ 0.624e-8■■■■■ 35.7
SFSWAP-203ENST00000535236 FAM71DQ8N9W8 422 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 CYGBQ8WWM9 190 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 DDIT4Q9NX09 232 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 TRMT6Q9UJA5 497 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 TULP4Q9NRJ4 1543 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 C2orf81A6NN90 581 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 MBL2P11226 248 aaPredicted RBP18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 MLNP12872 115 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 MUTP22033 750 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 TRIM65Q6PJ69 517 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 RBBP8Q99708 897 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 CAPN10Q9HC96 672 aa18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.91■□□□□ 0.62
SFSWAP-203ENST00000535236 AASDHQ4L235 1098 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 MFSD4BQ5TF39 518 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 INPP5DQ92835 1189 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 EME1Q96AY2 570 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 STAMBPL1Q96FJ0 436 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 CSF1RP07333 972 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 TRPC1P48995 793 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 GEMP55040 296 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 MRPL28Q13084 256 aaKnown RBP18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 EPC2Q52LR7 807 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 BTNL9Q6UXG8 535 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 LONP2Q86WA8 852 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 PPIL6Q8IXY8 311 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 MRPS31Q92665 395 aaKnown RBP18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 NDEL1Q9GZM8 345 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 EIF4E1BA6NMX2 242 aaKnown RBP18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 AP1G2O75843 785 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 APOA4P06727 396 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 PCYT1AP49585 367 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 C1orf131Q8NDD1 294 aaKnown RBP18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 WNK4Q96J92 1243 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 C17orf75Q9HAS0 396 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 LZTS3O60299 673 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 PMPCBO75439 489 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 NTSR2O95665 410 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 ITGA8P53708 1063 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 PMS1P54277 932 aaKnown RBP18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 DYNC1I2Q13409 638 aaKnown RBP18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 AMHR2Q16671 573 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 BOLA3Q53S33 107 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 GLRA4Q5JXX5 417 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 FBXO33Q7Z6M2 555 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 TEX9Q8N6V9 391 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 MAP3K14Q99558 947 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 ZSCAN32Q9NX65 697 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 HOXA2O43364 376 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 DAB1O75553 588 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 CDR2LQ86X02 465 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 SPACA6W5XKT8 324 aa18.9■□□□□ 0.62
SFSWAP-203ENST00000535236 TET3O43151 1660 aa18.89■□□□□ 0.62
SFSWAP-203ENST00000535236 PREX2Q70Z35 1606 aa18.89■□□□□ 0.62
SFSWAP-203ENST00000535236 ZNF484Q5JVG2 852 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 PLEKHH3Q7Z736 793 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 CERKQ8TCT0 537 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 DIS3LQ8TF46 1054 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms