RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 TBXAS1P24557 533 aaPredicted RBP18.19■□□□□ 0.5
SIPA1-209ENST00000534313 RFC1P35251 1148 aaPredicted RBP18.19■□□□□ 0.5
SIPA1-209ENST00000534313 MSH2P43246 934 aa18.19■□□□□ 0.5
SIPA1-209ENST00000534313 NAMPTP43490 491 aa18.19■□□□□ 0.5
SIPA1-209ENST00000534313 TGFB2P61812 414 aa18.19■□□□□ 0.5
SIPA1-209ENST00000534313 ZNF268Q14587 947 aaPredicted RBP18.19■□□□□ 0.5
SIPA1-209ENST00000534313 TRIM50Q86XT4 487 aa18.19■□□□□ 0.5
SIPA1-209ENST00000534313 CEP120Q8N960 986 aa18.19■□□□□ 0.5
SIPA1-209ENST00000534313 DHX33Q9H6R0 707 aaKnown RBP18.19■□□□□ 0.5
SIPA1-209ENST00000534313 ACAD9Q9H845 621 aa18.19■□□□□ 0.5
SIPA1-209ENST00000534313 POLIQ9UNA4 740 aa18.19■□□□□ 0.5
SIPA1-209ENST00000534313 STYXL1Q9Y6J8 313 aa18.19■□□□□ 0.5
SIPA1-209ENST00000534313 KRT19P08727 400 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 TAF5Q15542 800 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 SLFN12LQ6IEE8 588 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 PRPF31Q8WWY3 499 aaKnown RBP18.18■□□□□ 0.5
SIPA1-209ENST00000534313 TCRBV7S3A2A0A539 114 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 H0YCG3 227 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 KRT4P19013 534 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 TFDP3Q5H9I0 405 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 ACTL9Q8TC94 416 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 FBF1Q8TES7 1133 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 VCPIP1Q96JH7 1222 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 PSMA2P25787 234 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 IL1R2P27930 398 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 VCPP55072 806 aaKnown RBP18.18■□□□□ 0.5
SIPA1-209ENST00000534313 CDH8P55286 799 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 OTUD4Q01804 1114 aaKnown RBP18.18■□□□□ 0.5
SIPA1-209ENST00000534313 OVGP1Q12889 678 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 FNBP1LQ5T0N5 605 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 RNASEH2BQ5TBB1 312 aaKnown RBP18.18■□□□□ 0.5
SIPA1-209ENST00000534313 DENND1BQ6P3S1 775 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 TEX13BQ9BXU2 312 aa18.18■□□□□ 0.5
SIPA1-209ENST00000534313 CST8O60676 142 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 ARL2P36404 184 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 CDKN2BP42772 138 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 CTCFP49711 727 aaPredicted RBP18.17■□□□□ 0.5
SIPA1-209ENST00000534313 GPX6P59796 221 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 TRPC3Q13507 836 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 CCDC6Q16204 474 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 HHATQ5VTY9 493 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 AP1ARQ63HQ0 302 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 XRRA1Q6P2D8 792 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 DLK2Q6UY11 383 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 RHPN2Q8IUC4 686 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 CHKBQ9Y259 395 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 NEFHP12036 1026 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 LMNB2Q03252 620 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 SPARCL1Q14515 664 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 TMEM132AQ24JP5 1023 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 LVRNQ6Q4G3 990 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 SCYL3Q8IZE3 742 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 TMEM35BQ8NCS4 154 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 LRRC8CQ8TDW0 803 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 PPP1R16BQ96T49 567 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 ARHGEF3Q9NR81 526 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 DCTN4Q9UJW0 460 aa18.17■□□□□ 0.5
SIPA1-209ENST00000534313 CBX6O95503 412 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 LDHAP00338 332 aaKnown RBP18.16■□□□□ 0.5
SIPA1-209ENST00000534313 ASS1P00966 412 aaKnown RBP18.16■□□□□ 0.5
SIPA1-209ENST00000534313 OASLQ15646 514 aaKnown RBP18.16■□□□□ 0.5
SIPA1-209ENST00000534313 BBS9Q3SYG4 887 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 CENPUQ71F23 418 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 KIAA0319LQ8IZA0 1049 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 GBP7Q8N8V2 638 aaPredicted RBP18.16■□□□□ 0.5
SIPA1-209ENST00000534313 MAGEC3Q8TD91 643 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 MAFBQ9Y5Q3 323 aaPredicted RBP18.16■□□□□ 0.5
SIPA1-209ENST00000534313 ADGRA2Q96PE1 1338 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 CSDE1O75534 798 aaKnown RBP18.16■□□□□ 0.5
SIPA1-209ENST00000534313 GMPSP49915 693 aaPredicted RBP18.16■□□□□ 0.5
SIPA1-209ENST00000534313 SETDB1Q15047 1291 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 STXBP2Q15833 593 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 LRRN4Q8WUT4 740 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 CDHR1Q96JP9 859 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 PCYT2Q99447 389 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 MYH9P35579 1960 aaKnown RBP18.16■□□□□ 0.5
SIPA1-209ENST00000534313 NFASCO94856 1347 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 CALB1P05937 261 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 ADRA1DP25100 572 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 HIF1AQ16665 826 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 PTPN20Q4JDL3 420 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 PYROXD1Q8WU10 500 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 HSPH1Q92598 858 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 UTP4Q969X6 686 aaKnown RBP18.16■□□□□ 0.5
SIPA1-209ENST00000534313 NPHS2Q9NP85 383 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 CYTH4Q9UIA0 394 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 FER1L6Q2WGJ9 1857 aa18.16■□□□□ 0.5
SIPA1-209ENST00000534313 SMIM24O75264 130 aa18.15■□□□□ 0.5
SIPA1-209ENST00000534313 ATP2A2P16615 1042 aaKnown RBP18.15■□□□□ 0.5
SIPA1-209ENST00000534313 MKRN3Q13064 507 aaKnown RBP18.15■□□□□ 0.5
SIPA1-209ENST00000534313 ARFGAP1Q8N6T3 406 aa18.15■□□□□ 0.5
SIPA1-209ENST00000534313 RNF149Q8NC42 400 aa18.15■□□□□ 0.5
SIPA1-209ENST00000534313 DENND1AQ8TEH3 1009 aa18.15■□□□□ 0.5
SIPA1-209ENST00000534313 WDR81Q562E7 1941 aa18.15■□□□□ 0.5
SIPA1-209ENST00000534313 CLUHO75153 1309 aa18.15■□□□□ 0.5
SIPA1-209ENST00000534313 STAM2O75886 525 aa18.15■□□□□ 0.5
SIPA1-209ENST00000534313 UBA1P22314 1058 aaKnown RBP18.15■□□□□ 0.5
SIPA1-209ENST00000534313 ZNF132P52740 706 aa18.15■□□□□ 0.5
SIPA1-209ENST00000534313 MXRA7P84157 204 aa18.15■□□□□ 0.5
SIPA1-209ENST00000534313 RNF43Q68DV7 783 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms