RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 FAM171BQ6P995 826 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 C4orf50Q6ZRC1 276 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 RTL10Q7L3V2 364 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 SPATA2LQ8IUW3 424 aaPredicted RBP23.75■■□□□ 1.39
LRRK1-208ENST00000532029 TCEAL8Q8IYN2 117 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 ATAD1Q8NBU5 361 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 B3GALNT2Q8NCR0 500 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 RNF214Q8ND24 703 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 SPPL2BQ8TCT7 592 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 CRTAC1Q9NQ79 661 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 TMLHEQ9NVH6 421 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 ABI2Q9NYB9 513 aaPredicted RBP23.75■■□□□ 1.39
LRRK1-208ENST00000532029 APEX2Q9UBZ4 518 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 HMGXB4Q9UGU5 601 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 H3BQ06 376 aaPredicted RBP23.74■■□□□ 1.39
LRRK1-208ENST00000532029 SEC24AO95486 1093 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 MFAP3P55082 362 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 DUSP4Q13115 394 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 ORC1Q13415 861 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 CLUL1Q15846 466 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 MDH1BQ5I0G3 518 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 RARS2Q5T160 578 aaKnown RBP23.74■■□□□ 1.39
LRRK1-208ENST00000532029 ENOSF1Q7L5Y1 443 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 APTXQ7Z2E3 356 aaKnown RBP23.74■■□□□ 1.39
LRRK1-208ENST00000532029 ACOT1Q86TX2 421 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 C12orf76Q8N812 135 aaPredicted RBP23.74■■□□□ 1.39
LRRK1-208ENST00000532029 MYCBPAPQ8TBZ2 947 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 PCMTD1Q96MG8 357 aaPredicted RBP23.74■■□□□ 1.39
LRRK1-208ENST00000532029 PKMYT1Q99640 499 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 LSM14BQ9BX40 385 aaKnown RBP23.74■■□□□ 1.39
LRRK1-208ENST00000532029 ZDHHC7Q9NXF8 308 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 CD207Q9UJ71 328 aa23.74■■□□□ 1.39
LRRK1-208ENST00000532029 HNRNPA1P09651 372 aaKnown RBP eCLIP23.73■■□□□ 1.39
LRRK1-208ENST00000532029 CDR1P51861 262 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 CYP27A1Q02318 531 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 KCNMA1Q12791 1236 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 ZNF394Q53GI3 561 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 SYCE2Q6PIF2 218 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 CRYBG2Q8N1P7 616 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 KAT5Q92993 513 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 MYLPFQ96A32 169 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 MSLNLQ96KJ4 702 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 TWNKQ96RR1 684 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 APOL5Q9BWW9 433 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 PRDM6Q9NQX0 595 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 HSFX1Q9UBD0 423 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 PCDHB4Q9Y5E5 795 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 INSL5Q9Y5Q6 135 aa23.73■■□□□ 1.39
LRRK1-208ENST00000532029 RFPL2O75678 378 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 VNN2O95498 520 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 LRG1P02750 347 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 TUFMP49411 452 aaKnown RBP23.72■■□□□ 1.39
LRRK1-208ENST00000532029 FANCCQ00597 558 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 CCDC142Q17RM4 750 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 MGAT5BQ3V5L5 792 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 CES5AQ6NT32 575 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 GJB7Q6PEY0 223 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 CMASQ8NFW8 434 aaPredicted RBP23.72■■□□□ 1.39
LRRK1-208ENST00000532029 WHAMMQ8TF30 809 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 JAKMIP2Q96AA8 810 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 PCED1BQ96HM7 432 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 FUBP3Q96I24 572 aaKnown RBP eCLIP23.72■■□□□ 1.39
LRRK1-208ENST00000532029 SEPT5Q99719 369 aaPredicted RBP23.72■■□□□ 1.39
LRRK1-208ENST00000532029 ELOVL4Q9GZR5 314 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 ABCB6Q9NP58 842 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 SIX2Q9NPC8 291 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 THEGQ9P2T0 379 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 SLC27A5Q9Y2P5 690 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 YIPF1Q9Y548 306 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 ATP8B3O60423 1300 aa23.72■■□□□ 1.39
LRRK1-208ENST00000532029 CCDC195A0A1B0GUA6 201 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 HAPLN1P10915 354 aaPredicted RBP23.71■■□□□ 1.39
LRRK1-208ENST00000532029 HOXA9P31269 272 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 ALDH1A3P47895 512 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 APBA1Q02410 837 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 PLD1Q13393 1074 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 SYCP1Q15431 976 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 TMEM270Q6UE05 265 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 TMC5Q6UXY8 1006 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 UBR7Q8N806 425 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 TMEM176AQ96HP8 235 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 KREMEN1Q96MU8 473 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 LPIN3Q9BQK8 851 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 MED10Q9BTT4 135 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 CRISPLD1Q9H336 500 aa23.71■■□□□ 1.39
LRRK1-208ENST00000532029 RTN4Q9NQC3 1192 aaKnown RBP23.71■■□□□ 1.39
LRRK1-208ENST00000532029 A0A1B0GTH6 734 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 XYLBO75191 536 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 ITIH3Q06033 890 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 ARHGAP44Q17R89 818 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 CFAP221Q4G0U5 840 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 KLHDC7AQ5VTJ3 777 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 TTC9BQ8N6N2 239 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 HEXIM2Q96MH2 286 aaKnown RBP23.7■■□□□ 1.38
LRRK1-208ENST00000532029 ERGIC2Q96RQ1 377 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 PRKD2Q9BZL6 878 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 ADAM7Q9H2U9 754 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 PIDD1Q9HB75 910 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 PLCB1Q9NQ66 1216 aa23.7■■□□□ 1.38
LRRK1-208ENST00000532029 DNAJC12Q9UKB3 198 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms