RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 DDX27Q96GQ7 796 aaKnown RBP10.22□□□□□ -0.77
NPIPA3-202ENST00000531598 AP1M1Q9BXS5 423 aa10.22□□□□□ -0.77
NPIPA3-202ENST00000531598 FOXP3Q9BZS1 431 aa10.22□□□□□ -0.77
NPIPA3-202ENST00000531598 SNX25Q9H3E2 840 aa10.22□□□□□ -0.77
NPIPA3-202ENST00000531598 SMYD3Q9H7B4 428 aa10.22□□□□□ -0.77
NPIPA3-202ENST00000531598 PRDM16Q9HAZ2 1276 aa10.22□□□□□ -0.77
NPIPA3-202ENST00000531598 ASNSD1Q9NWL6 643 aa10.22□□□□□ -0.77
NPIPA3-202ENST00000531598 EHD2Q9NZN4 543 aa10.22□□□□□ -0.77
NPIPA3-202ENST00000531598 POLIQ9UNA4 740 aa10.22□□□□□ -0.77
NPIPA3-202ENST00000531598 IPPQ9Y573 584 aa10.22□□□□□ -0.77
NPIPA3-202ENST00000531598 CDY2AQ9Y6F7 541 aa10.22□□□□□ -0.77
NPIPA3-202ENST00000531598 KPNA7A9QM74 516 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 GOLGA8KD6RF30 607 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 ZNF623O75123 536 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 ECEL1O95672 775 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 ITGA4P13612 1032 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 PCK1P35558 622 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 COILP38432 576 aaPredicted RBP10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 GPD2P43304 727 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 PLA2G4AP47712 749 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 NDST1P52848 882 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 BCAT1P54687 386 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 RNASE9P60153 205 aaKnown RBP10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 CACNB2Q08289 660 aaPredicted RBP10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 TMEM62Q0P6H9 643 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 PDCLQ13371 301 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 HLTFQ14527 1009 aaKnown RBP eCLIP10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 CCNG2Q16589 344 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 ZNF394Q53GI3 561 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 FAM26DQ5JW98 314 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 UBXN11Q5T124 520 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 DENND1BQ6P3S1 775 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 CCDC137Q6PK04 289 aaKnown RBP10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 LIMS2Q7Z4I7 341 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 MRPL10Q7Z7H8 261 aaKnown RBP10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 FAM228AQ86W67 206 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 SLAIN1Q8ND83 568 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 TRPV1Q8NER1 839 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 ATL2Q8NHH9 583 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 IFT81Q8WYA0 676 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 TFAP2BQ92481 460 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 KRT35Q92764 455 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 MCRS1Q96EZ8 462 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 CAPNS2Q96L46 248 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 HSFY1Q96LI6 401 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 UROC1Q96N76 676 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 MCEEQ96PE7 176 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 EIF2AQ9BY44 585 aaKnown RBP10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 SENP6Q9GZR1 1112 aaPredicted RBP10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 ELOVL4Q9GZR5 314 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 DDX47Q9H0S4 455 aaKnown RBP10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 SMARCAL1Q9NZC9 954 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 DDX20Q9UHI6 824 aaKnown RBP10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 HPCAL4Q9UM19 191 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 SNX9Q9Y5X1 595 aa10.21□□□□□ -0.77
NPIPA3-202ENST00000531598 GOLGA6L10A6NI86 522 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 A8MXQ7 604 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 DPYSL4O14531 572 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 MEFVO15553 781 aaPredicted RBP10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 SASH3O75995 380 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 FGFR4P22455 802 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 WARSP23381 471 aaKnown RBP10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 PSMA2P25787 234 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 HSPA9P38646 679 aaKnown RBP10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 SSR1P43307 286 aaKnown RBP10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 LHX1P48742 406 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 EIF3BP55884 814 aaKnown RBP10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 SLC7A5Q01650 507 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 NFX1Q12986 1120 aaKnown RBP10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 CALCOCO2Q13137 446 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 SLMAPQ14BN4 828 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 PTPN20Q4JDL3 420 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 FAM47CQ5HY64 1035 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 MAP3K21Q5TCX8 1036 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 CYP4F22Q6NT55 531 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 CXCL17Q6UXB2 119 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 JAMLQ86YT9 394 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 CCDC50Q8IVM0 306 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 MAP7D3Q8IWC1 876 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 CCDC105Q8IYK2 499 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 WDTC1Q8N5D0 677 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 PRELID2Q8N945 189 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 CCDC89Q8N998 374 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 ARRDC4Q8NCT1 418 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 HDAC7Q8WUI4 952 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 CASKIN2Q8WXE0 1202 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 GLT1D1Q96MS3 346 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 TBCBQ99426 244 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 CNPY3Q9BT09 278 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 OSBPL8Q9BZF1 889 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 SDCBP2Q9H190 292 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 NXF3Q9H4D5 531 aaKnown RBP10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 CDHR5Q9HBB8 845 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 FAM105AQ9NUU6 356 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 SAGE1Q9NXZ1 904 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 WHRNQ9P202 907 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 AMACRQ9UHK6 382 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 TSPAN16Q9UKR8 245 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 DSEQ9UL01 958 aa10.2□□□□□ -0.78
NPIPA3-202ENST00000531598 GABRQQ9UN88 632 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms