RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PTGESO14684 152 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 SLC16A4O15374 487 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 AKAP3O75969 853 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 ZSCAN22P10073 491 aaPredicted RBP9.24□□□□□ -0.93
SSBP3-212ENST00000528930 CHRNB1P11230 501 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 PDIA4P13667 645 aaKnown RBP9.24□□□□□ -0.93
SSBP3-212ENST00000528930 PROZP22891 400 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 ZNF131P52739 623 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 SIM1P81133 766 aaPredicted RBP9.24□□□□□ -0.93
SSBP3-212ENST00000528930 CFHR1Q03591 330 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 DHX8Q14562 1220 aaKnown RBP9.24□□□□□ -0.93
SSBP3-212ENST00000528930 NAB2Q15742 525 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 DCAF4L1Q3SXM0 396 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 CCNI2Q6ZMN8 369 aaPredicted RBP9.24□□□□□ -0.93
SSBP3-212ENST00000528930 GPBP1Q86WP2 473 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 HACE1Q8IYU2 909 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 RNF168Q8IYW5 571 aaPredicted RBP9.24□□□□□ -0.93
SSBP3-212ENST00000528930 LINC00528Q8N1L1 170 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 LARP4BQ92615 738 aaKnown RBP9.24□□□□□ -0.93
SSBP3-212ENST00000528930 FAM193BQ96PV7 902 aaPredicted RBP9.24□□□□□ -0.93
SSBP3-212ENST00000528930 REEP2Q9BRK0 252 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 ADPGKQ9BRR6 497 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 TARS2Q9BW92 718 aaKnown RBP9.24□□□□□ -0.93
SSBP3-212ENST00000528930 LMAN1LQ9HAT1 526 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 KCNG1Q9UIX4 513 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 DNMT3LQ9UJW3 386 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 ODF2LQ9ULJ1 636 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 ADAMTS9Q9P2N4 1935 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 ABCA7Q8IZY2 2146 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 NOTCH2Q04721 2471 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 A0A087X0B3 334 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 ENO4A6NNW6 628 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 F8W810 466 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 PYCARD-AS1I3L0S3 204 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 PPP6R2O75170 966 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 RPP40O75818 363 aaKnown RBP9.23□□□□□ -0.93
SSBP3-212ENST00000528930 RECQL4O94761 1208 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 F13A1P00488 732 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 HSP90AA1P07900 732 aaKnown RBP9.23□□□□□ -0.93
SSBP3-212ENST00000528930 MAPTP10636 758 aaKnown RBP9.23□□□□□ -0.93
SSBP3-212ENST00000528930 OR1G1P47890 313 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 SMTNP53814 917 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 NCKAP1LP55160 1127 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 GRIK3Q13003 919 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 STK38Q15208 465 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 TMEM132AQ24JP5 1023 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 FOXD4L5Q5VV16 416 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-212ENST00000528930 ELMSAN1Q6PJG2 1045 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 PCSK4Q6UW60 755 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 TAS1R1Q7RTX1 841 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 HAUS6Q7Z4H7 955 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 PIP4P1Q86T03 277 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 CEP120Q8N960 986 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 HDAC7Q8WUI4 952 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 FOXD4L4Q8WXT5 416 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-212ENST00000528930 ZBTB45Q96K62 511 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-212ENST00000528930 ZNF396Q96N95 335 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-212ENST00000528930 FIZ1Q96SL8 496 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 KXD1Q9BQD3 176 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 PAAF1Q9BRP4 392 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 MRPL4Q9BYD3 311 aaKnown RBP9.23□□□□□ -0.93
SSBP3-212ENST00000528930 CDT1Q9H211 546 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 PRORYQ9H606 182 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 ZDHHC7Q9NXF8 308 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 LARSQ9P2J5 1176 aaKnown RBP9.23□□□□□ -0.93
SSBP3-212ENST00000528930 DPP7Q9UHL4 492 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 SRPK3Q9UPE1 567 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 GDAQ9Y2T3 454 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 PRG3Q9Y2Y8 225 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-212ENST00000528930 TRIP11Q15643 1979 aa9.23□□□□□ -0.93
SSBP3-212ENST00000528930 KIAA1549LQ6ZVL6 1849 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 CCDC163A0A0D9SF12 145 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 CAPN9O14815 690 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 SPTLC2O15270 562 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 MEFVO15553 781 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-212ENST00000528930 TRAK2O60296 914 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 YEATS4O95619 227 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 SOD2P04179 222 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 FSHRP23945 695 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 HOXC13P31276 330 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 ZNF423Q2M1K9 1284 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 XKR4Q5GH76 650 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 COLEC12Q5KU26 742 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 RRAGBQ5VZM2 374 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 ALKAL1Q6UXT8 129 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 RASSF8Q8NHQ8 419 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 RABGGTAQ92696 567 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 FGF13Q92913 245 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 DNAJC19Q96DA6 116 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 RPS6KC1Q96S38 1066 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 PANK2Q9BZ23 570 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 HAPLN2Q9GZV7 340 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 SLC32A1Q9H598 525 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 C2orf42Q9NWW7 574 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 CACNG4Q9UBN1 327 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 CCDC39Q9UFE4 941 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 ZDHHC9Q9Y397 364 aa9.22□□□□□ -0.93
SSBP3-212ENST00000528930 BCLAF3A2AJT9 711 aaKnown RBP9.21□□□□□ -0.94
SSBP3-212ENST00000528930 MYMKA6NI61 221 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 UPK3BL1B0FP48 263 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms