RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 CCSAPQ6IQ19 270 aaPredicted RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 MON1BQ7L1V2 547 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 ADAT2Q7Z6V5 191 aaKnown RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 NT5DC4Q86YG4 428 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 MYO1HQ8N1T3 1032 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 SMG8Q8ND04 991 aaKnown RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 VPS37AQ8NEZ2 397 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 SH3TC2Q8TF17 1288 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 LPPQ93052 612 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 RPGRIP1Q96KN7 1286 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 HEXIM2Q96MH2 286 aaKnown RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 PNKPQ96T60 521 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 SELENOOQ9BVL4 669 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 SLC7A5P2Q9GIP4 190 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 SENP6Q9GZR1 1112 aaPredicted RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 NACA2Q9H009 215 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 AGO3Q9H9G7 860 aaKnown RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 HMX1Q9NP08 348 aaPredicted RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 RBM12Q9NTZ6 932 aaKnown RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 SCN10AQ9Y5Y9 1956 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 CDR1P51861 262 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 NDST1P52848 882 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 PTPN11Q06124 597 aaPredicted RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 LLGL1Q15334 1064 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 CYP4A22Q5TCH4 519 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 DENND1BQ6P3S1 775 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 TMEM35BQ8NCS4 154 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 KRT35Q92764 455 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 HES6Q96HZ4 224 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 FAXDC2Q96IV6 333 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 CFHR5Q9BXR6 569 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 AP1M1Q9BXS5 423 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 ELOVL4Q9GZR5 314 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 TRPV6Q9H1D0 765 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 CNTN3Q9P232 1028 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 UVRAGQ9P2Y5 699 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 CACNG4Q9UBN1 327 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 IP6K2Q9UHH9 426 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 UBQLN1Q9UMX0 589 aaKnown RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 STXBP5LQ9Y2K9 1186 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 PTCH2Q9Y6C5 1203 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 CITO14578 2027 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 MYO1FO00160 1098 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 CILPO75339 1184 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 NEBLO76041 1014 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 SEC31AO94979 1220 aaKnown RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 H2AFXP16104 143 aaPredicted RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 CST5P28325 142 aaPredicted RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 GJC1P36383 396 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 MLH1P40692 756 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 SOX4Q06945 474 aaPredicted RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 DAB2IPQ5VWQ8 1189 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 C9orf57Q5W0N0 161 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 C11orf63Q6NUN7 778 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 KLHL7Q8IXQ5 586 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 SLC4A11Q8NBS3 891 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 PXYLP1Q8TE99 480 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 WHAMMQ8TF30 809 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 ALG3Q92685 438 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 TMEM176AQ96HP8 235 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 SYNCQ9H7C4 482 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 CYP3A43Q9HB55 503 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 ABCB6Q9NP58 842 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 FAM105AQ9NUU6 356 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 PADI3Q9ULW8 664 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 DERAQ9Y315 318 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 ANK1P16157 1881 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 HMGB1P1B2RPK0 211 aaPredicted RBP8.15□□□□□ -1.1
SOX6-211ENST00000528429 GOLGA8SH3BPF8 625 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 M0QYV0 167 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 PGRMC1O00264 195 aaKnown RBP8.15□□□□□ -1.1
SOX6-211ENST00000528429 MED7O43513 233 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 TPPPO94811 219 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 AFF1P51825 1210 aaKnown RBP8.15□□□□□ -1.1
SOX6-211ENST00000528429 HADHBP55084 474 aaKnown RBP8.15□□□□□ -1.1
SOX6-211ENST00000528429 VSNL1P62760 191 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 NKX3-2P78367 333 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 PAK2Q13177 524 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 ARHGEF6Q15052 776 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 ZBTB6Q15916 424 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 KCTD19Q17RG1 926 aaPredicted RBP8.15□□□□□ -1.1
SOX6-211ENST00000528429 PREPLQ4J6C6 727 aaPredicted RBP8.15□□□□□ -1.1
SOX6-211ENST00000528429 FBXO47Q5MNV8 452 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 AADACL2Q6P093 401 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 FAM117BQ6P1L5 589 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 TMCO3Q6UWJ1 677 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 ALKAL1Q6UXT8 129 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 ERICH1Q86X53 443 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 UBL4BQ8N7F7 174 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 C12orf29Q8N999 325 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 OR6B3Q8NGW1 331 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 PBKQ96KB5 322 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 DHRS1Q96LJ7 313 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 RPS6KC1Q96S38 1066 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 GAD1Q99259 594 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 MRPL45Q9BRJ2 306 aaKnown RBP8.15□□□□□ -1.1
SOX6-211ENST00000528429 LRRC1Q9BTT6 524 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 VRTNQ9H8Y1 702 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 STARD7Q9NQZ5 370 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 ST7Q9NRC1 585 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms