RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	CCDC114	Q96M63	670 aa		10.78	□□□□□ -0.68
PGAP2-231	ENST00000528216	MCEE	Q96PE7	176 aa		10.78	□□□□□ -0.68
PGAP2-231	ENST00000528216	ABHD16B	Q9H3Z7	469 aa		10.78	□□□□□ -0.68
PGAP2-231	ENST00000528216	RNPEP	Q9H4A4	650 aa		10.78	□□□□□ -0.68
PGAP2-231	ENST00000528216	PDZD7	Q9H5P4	517 aa		10.78	□□□□□ -0.68
PGAP2-231	ENST00000528216	CCDC134	Q9H6E4	229 aa		10.78	□□□□□ -0.68
PGAP2-231	ENST00000528216	AKT3	Q9Y243	479 aa		10.78	□□□□□ -0.68
PGAP2-231	ENST00000528216	PCNT	O95613	3336 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	LACTBL1	A8MY62	500 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216		H3BRB1	525 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	CA12	O43570	354 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	LIAS	O43766	372 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	KIAA0754	O94854	1291 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	HSPA1A	P0DMV8	641 aa	Known RBP	10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	HSPA1B	P0DMV9	641 aa	Known RBP	10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	CXCL8	P10145	99 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	KRT3	P12035	628 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	GRM5	P41594	1212 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	RAD23B	P54727	409 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	GUCY1A3	Q02108	690 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	MYO1E	Q12965	1108 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	NR1H3	Q13133	447 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	CRHR2	Q13324	411 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	STAT4	Q14765	748 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	TAZ	Q16635	292 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	WDR72	Q3MJ13	1102 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	VSIG1	Q86XK7	387 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	CPNE8	Q86YQ8	564 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	ZCCHC9	Q8N567	271 aa	Known RBP	10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	MYCBPAP	Q8TBZ2	947 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	TMEM176A	Q96HP8	235 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	ACAP3	Q96P50	834 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	CCT8L2	Q96SF2	557 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	PARK7	Q99497	189 aa	Known RBP	10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	C16orf70	Q9BSU1	422 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	KATNBL1	Q9H079	304 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	SEMA4A	Q9H3S1	761 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	R3HDML	Q9H3Y0	253 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	TUT1	Q9H6E5	874 aa	Known RBP	10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	EFCC1	Q9HA90	598 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	SIX4	Q9UIU6	781 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	UST	Q9Y2C2	406 aa		10.77	□□□□□ -0.68
PGAP2-231	ENST00000528216	hCG_1818297	A0A087WSY0	165 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216		A0A087WUV0	522 aa	Predicted RBP	10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216		A0A1B0GUA9	196 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	C5orf60	A6NFR6	353 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	SLC15A5	A6NIM6	579 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	GPR25	O00155	361 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	MYO1C	O00159	1063 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	CAND2	O75155	1236 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	CALCA	P01258	141 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	CFH	P08603	1231 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	KRT19	P08727	400 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	CD19	P15391	556 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	KLRC2	P26717	231 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	AXL	P30530	894 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	PCK1	P35558	622 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	MAGEA9	P43362	315 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	ITGA8	P53708	1063 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	VCP	P55072	806 aa	Known RBP	10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	GRB14	Q14449	540 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	MORF4L2	Q15014	288 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	DGKD	Q16760	1214 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	JADE1	Q6IE81	842 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	WDTC1	Q8N5D0	677 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	TRAPPC12	Q8WVT3	735 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	TFAP2B	Q92481	460 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	COPS5	Q92905	334 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	ELMO3	Q96BJ8	720 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	MCRS1	Q96EZ8	462 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	FAM84A	Q96KN4	292 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	MINDY3	Q9H8M7	445 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	PCDH9	Q9HC56	1237 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	PDGFC	Q9NRA1	345 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	NXF1	Q9UBU9	619 aa	Known RBP	10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	CPA4	Q9UI42	421 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	SHOC2	Q9UQ13	582 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216	ACTL7B	Q9Y614	415 aa		10.77	□□□□□ -0.69
PGAP2-231	ENST00000528216		A0A087WZ62	844 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	B4GALT5	O43286	388 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	RNF8	O76064	485 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	ECM2	O94769	699 aa	Predicted RBP	10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	ARF4	P18085	180 aa	Predicted RBP	10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	PSMA2	P25787	234 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	CDKN2B	P42772	138 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	PSMC1	P62191	440 aa	Known RBP	10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	RPL7A	P62424	266 aa	Known RBP	10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	SNX1	Q13596	522 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	RASA2	Q15283	850 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	FAM110C	Q1W6H9	321 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	ERMARD	Q5T6L9	678 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	GSTA5	Q7RTV2	222 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	TAX1BP1	Q86VP1	789 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	ALLC	Q8N6M5	410 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	LRRC52	Q8N7C0	313 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	SLC4A11	Q8NBS3	891 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	CXorf38	Q8TB03	319 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms