RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.97■□□□□ 0.31
CTTN-212ENST00000527962 PCDHGA5Q9Y5G8 931 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 ANKRD63C9JTQ0 380 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 GDF9O60383 454 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 HUS1O60921 280 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 MYL7Q01449 175 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 ZNF268Q14587 947 aaPredicted RBP16.96■□□□□ 0.31
CTTN-212ENST00000527962 ST3GAL2Q16842 350 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 ZC2HC1CQ53FD0 456 aaPredicted RBP16.96■□□□□ 0.31
CTTN-212ENST00000527962 WDR44Q5JSH3 913 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.31
CTTN-212ENST00000527962 ZNF720Q7Z2F6 126 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 LRRTM3Q86VH5 581 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 TMEM86AQ8N2M4 240 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 CPA6Q8N4T0 437 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 USP13Q92995 863 aaPredicted RBP16.96■□□□□ 0.31
CTTN-212ENST00000527962 TMX3Q96JJ7 454 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 ACBD6Q9BR61 282 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 ABCB6Q9NP58 842 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 SEL1LQ9UBV2 794 aa16.96■□□□□ 0.31
CTTN-212ENST00000527962 MAGED2Q9UNF1 606 aaPredicted RBP16.96■□□□□ 0.31
CTTN-212ENST00000527962 EPN2O95208 641 aa16.95■□□□□ 0.3
CTTN-212ENST00000527962 LDHAP00338 332 aaKnown RBP16.95■□□□□ 0.3
CTTN-212ENST00000527962 F11P03951 625 aa16.95■□□□□ 0.3
CTTN-212ENST00000527962 RAP1GAPP47736 663 aa16.95■□□□□ 0.3
CTTN-212ENST00000527962 NR1H3Q13133 447 aa16.95■□□□□ 0.3
CTTN-212ENST00000527962 FSIP1Q8NA03 581 aa16.95■□□□□ 0.3
CTTN-212ENST00000527962 LEO1Q8WVC0 666 aaPredicted RBP16.95■□□□□ 0.3
CTTN-212ENST00000527962 FIZ1Q96SL8 496 aa16.95■□□□□ 0.3
CTTN-212ENST00000527962 P2RY13Q9BPV8 354 aa16.95■□□□□ 0.3
CTTN-212ENST00000527962 PI4K2AQ9BTU6 479 aa16.95■□□□□ 0.3
CTTN-212ENST00000527962 MRPL44Q9H9J2 332 aaKnown RBP16.95■□□□□ 0.3
CTTN-212ENST00000527962 C2orf42Q9NWW7 574 aa16.95■□□□□ 0.3
CTTN-212ENST00000527962 ANGPTL2Q9UKU9 493 aa16.95■□□□□ 0.3
CTTN-212ENST00000527962 CHD8Q9HCK8 2581 aa16.95■□□□□ 0.3
CTTN-212ENST00000527962 KRT37O76014 449 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 RHOBTB1O94844 696 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 USP17L7P0C7H9 530 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 HMGA1P17096 107 aaKnown RBP16.94■□□□□ 0.3
CTTN-212ENST00000527962 GAP43P17677 238 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 TXLNAP40222 546 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 PXNP49023 591 aaPredicted RBP16.94■□□□□ 0.3
CTTN-212ENST00000527962 PDE6CP51160 858 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 CDR1P51861 262 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 TFAMQ00059 246 aaKnown RBP16.94■□□□□ 0.3
CTTN-212ENST00000527962 ELF2Q15723 593 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 TXNDC8Q6A555 127 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 FSTL4Q6MZW2 842 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 SPATA18Q8TC71 538 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 ATP2A3Q93084 1043 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 ACDQ96AP0 544 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 TRMT2BQ96GJ1 504 aaKnown RBP16.94■□□□□ 0.3
CTTN-212ENST00000527962 ZC3H10Q96K80 434 aaKnown RBP16.94■□□□□ 0.3
CTTN-212ENST00000527962 ACCSQ96QU6 501 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 UPF2Q9HAU5 1272 aaKnown RBP16.94■□□□□ 0.3
CTTN-212ENST00000527962 HPS4Q9NQG7 708 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 VPS45Q9NRW7 570 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 DDX43Q9NXZ2 648 aaKnown RBP16.94■□□□□ 0.3
CTTN-212ENST00000527962 STK17AQ9UEE5 414 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 CCL26Q9Y258 94 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 PCDHB13Q9Y5F0 798 aa16.94■□□□□ 0.3
CTTN-212ENST00000527962 PDCD11Q14690 1871 aaKnown RBP16.94■□□□□ 0.3
CTTN-212ENST00000527962 TRAV19A0A0A6YYK7 116 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 RNF40O75150 1001 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 IFNAR2P48551 515 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 LHX1P48742 406 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 GALK1P51570 392 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 FAM160A1Q05DH4 1040 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 SF3A1Q15459 793 aaKnown RBP16.93■□□□□ 0.3
CTTN-212ENST00000527962 TRIM68Q6AZZ1 485 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 TMEM150AQ86TG1 271 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 KBTBD6Q86V97 674 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 C11orf74Q86VG3 221 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 SYCP3Q8IZU3 236 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 PDCL2Q8N4E4 241 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 LRRC52Q8N7C0 313 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 FAM213AQ9BRX8 229 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 TMEM206Q9H813 350 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 TRPC7Q9HCX4 862 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 DUS2Q9NX74 493 aaKnown RBP16.93■□□□□ 0.3
CTTN-212ENST00000527962 ITGA11Q9UKX5 1188 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 AGAP1Q9UPQ3 857 aa16.93■□□□□ 0.3
CTTN-212ENST00000527962 MYH11P35749 1972 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 TISP43B9A030 160 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 APBB3O95704 486 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 EGFP01133 1207 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 ITGB3P05106 788 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 CKMP06732 381 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 PCSK1P29120 753 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 POLR2BP30876 1174 aaKnown RBP16.92■□□□□ 0.3
CTTN-212ENST00000527962 ALCAMQ13740 583 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 MTF1Q14872 753 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 SF3A2Q15428 464 aaKnown RBP16.92■□□□□ 0.3
CTTN-212ENST00000527962 STPG1Q5TH74 334 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 CRELD2Q6UXH1 353 aaPredicted RBP16.92■□□□□ 0.3
CTTN-212ENST00000527962 SV2BQ7L1I2 683 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 SYT13Q7L8C5 426 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 DYMQ7RTS9 669 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 SFR1Q86XK3 245 aa16.92■□□□□ 0.3
CTTN-212ENST00000527962 SPATA2LQ8IUW3 424 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms