RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 ZSWIM2Q8NEG5 633 aa11.96□□□□□ -0.49
NR1H3-230ENST00000527949 SHKBP1Q8TBC3 707 aa11.96□□□□□ -0.49
NR1H3-230ENST00000527949 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
NR1H3-230ENST00000527949 ING5Q8WYH8 240 aa11.96□□□□□ -0.49
NR1H3-230ENST00000527949 TCEAL4Q96EI5 215 aa11.96□□□□□ -0.49
NR1H3-230ENST00000527949 MCRS1Q96EZ8 462 aa11.96□□□□□ -0.49
NR1H3-230ENST00000527949 MSANTD3Q96H12 275 aa11.96□□□□□ -0.49
NR1H3-230ENST00000527949 CEP295NLQ96MC4 621 aa11.96□□□□□ -0.49
NR1H3-230ENST00000527949 SCAND2PQ9GZW5 306 aaPredicted RBP11.96□□□□□ -0.49
NR1H3-230ENST00000527949 AGAP1Q9UPQ3 857 aa11.96□□□□□ -0.49
NR1H3-230ENST00000527949 ZDHHC9Q9Y397 364 aa11.96□□□□□ -0.49
NR1H3-230ENST00000527949 CACNA1IQ9P0X4 2223 aa11.96□□□□□ -0.49
NR1H3-230ENST00000527949 CEP250Q9BV73 2442 aa11.96□□□□□ -0.5
NR1H3-230ENST00000527949 CACNA1BQ00975 2339 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
NR1H3-230ENST00000527949 FRYLO94915 3013 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 A0A1W2PQ27 194 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 A0A1W2PQ64 194 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 A0A1W2PQD8 194 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 GOLGA8IPA6NC78 632 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 GOLGA8JA6NMD2 632 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 KLRC4O43908 158 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 STAU1O95793 577 aaKnown RBP11.95□□□□□ -0.5
NR1H3-230ENST00000527949 TNNC2P02585 160 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 HAPLN1P10915 354 aaPredicted RBP11.95□□□□□ -0.5
NR1H3-230ENST00000527949 CD72P21854 359 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 PCSK1P29120 753 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 MYL7Q01449 175 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 TSPY1Q01534 308 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 DMWDQ09019 674 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 MYO1EQ12965 1108 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 VEPH1Q14D04 833 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 CSRP2Q16527 193 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 SNRNP35Q16560 246 aaKnown RBP11.95□□□□□ -0.5
NR1H3-230ENST00000527949 KNOP1Q1ED39 458 aaKnown RBP11.95□□□□□ -0.5
NR1H3-230ENST00000527949 SLC39A12Q504Y0 691 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 PPM1JQ5JR12 505 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 TANGO2Q6ICL3 276 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 DNAJB7Q7Z6W7 309 aaPredicted RBP11.95□□□□□ -0.5
NR1H3-230ENST00000527949 CBWD2Q8IUF1 395 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 SLC9A9Q8IVB4 645 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 HS6ST3Q8IZP7 471 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 PDCL2Q8N4E4 241 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 CSGALNACT2Q8N6G5 542 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 FUBP3Q96I24 572 aaKnown RBP eCLIP11.95□□□□□ -0.5
NR1H3-230ENST00000527949 SPATA32Q96LK8 384 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 PGLYRP2Q96PD5 576 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 TMEM209Q96SK2 561 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 PKMYT1Q99640 499 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 TRMT61BQ9BVS5 477 aaKnown RBP11.95□□□□□ -0.5
NR1H3-230ENST00000527949 MTMR12Q9C0I1 747 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 PCIF1Q9H4Z3 704 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 BRD9Q9H8M2 597 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 HEBP1Q9NRV9 189 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 L1RE1Q9UN81 338 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 MIA3Q5JRA6 1907 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 DENND4CQ5VZ89 1909 aa11.95□□□□□ -0.5
NR1H3-230ENST00000527949 NUP210Q8TEM1 1887 aaPredicted RBP11.95□□□□□ -0.5
NR1H3-230ENST00000527949 FANCMQ8IYD8 2048 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 MYL4P12829 197 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 PFKFB1P16118 471 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 PSMC3P17980 439 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 CDC25CP30307 473 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 AP3M2P53677 418 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 CYP24A1Q07973 514 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 FZD5Q13467 585 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 CUL4BQ13620 913 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 CFAP221Q4G0U5 840 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 INTS6LQ5JSJ4 861 aaKnown RBP11.94□□□□□ -0.5
NR1H3-230ENST00000527949 TSSK4Q6SA08 328 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 GAREM2Q75VX8 874 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 LRRTM3Q86VH5 581 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 MFSD6LQ8IWD5 586 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 ST13P5Q8NFI4 369 aaPredicted RBP11.94□□□□□ -0.5
NR1H3-230ENST00000527949 HPS3Q969F9 1004 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 PAGE5Q96GU1 130 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 CGRRF1Q99675 332 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 DMAC2Q9NW81 257 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 SERTAD1Q9UHV2 236 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 R3HCC1Q9Y3T6 440 aaKnown RBP11.94□□□□□ -0.5
NR1H3-230ENST00000527949 PCDHB5Q9Y5E4 795 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 COL4A2P08572 1712 aa11.94□□□□□ -0.5
NR1H3-230ENST00000527949 PTPRJQ12913 1337 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.93□□□□□ -0.5
NR1H3-230ENST00000527949 TACC1O75410 805 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 TDGF1P13385 188 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 ATF6P18850 670 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 DDX6P26196 483 aaKnown RBP eCLIP11.93□□□□□ -0.5
NR1H3-230ENST00000527949 ATICP31939 592 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 MAGEA11P43364 429 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 CXCL12P48061 93 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 RPL10AP62906 217 aaKnown RBP11.93□□□□□ -0.5
NR1H3-230ENST00000527949 CLDN10P78369 228 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 ENPEPQ07075 957 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 FCHO2Q0JRZ9 810 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 SPEM2Q0P670 501 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 BFSP1Q12934 665 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 SIM2Q14190 667 aaPredicted RBP11.93□□□□□ -0.5
NR1H3-230ENST00000527949 LRRC32Q14392 662 aa11.93□□□□□ -0.5
NR1H3-230ENST00000527949 MAPRE1Q15691 268 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms