RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 SOX13Q9UN79 622 aa13.09□□□□□ -0.31
TSKU-203ENST00000527881 INPP5FQ9Y2H2 1132 aa13.09□□□□□ -0.31
TSKU-203ENST00000527881 DOCK2Q92608 1830 aa13.09□□□□□ -0.31
TSKU-203ENST00000527881 PHRF1Q9P1Y6 1649 aaKnown RBP13.09□□□□□ -0.31
TSKU-203ENST00000527881 C6orf222P0C671 652 aaPredicted RBP13.09□□□□□ -0.31
TSKU-203ENST00000527881 GAP43P17677 238 aa13.09□□□□□ -0.31
TSKU-203ENST00000527881 MSLNQ13421 630 aaPredicted RBP13.09□□□□□ -0.31
TSKU-203ENST00000527881 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
TSKU-203ENST00000527881 KCTD1Q719H9 257 aa13.09□□□□□ -0.31
TSKU-203ENST00000527881 TRIML2Q8N7C3 387 aa13.09□□□□□ -0.31
TSKU-203ENST00000527881 ATP11CQ8NB49 1132 aa13.09□□□□□ -0.31
TSKU-203ENST00000527881 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.09□□□□□ -0.31
TSKU-203ENST00000527881 DNPEPQ9ULA0 475 aa13.09□□□□□ -0.31
TSKU-203ENST00000527881 DMTF1Q9Y222 760 aa13.09□□□□□ -0.31
TSKU-203ENST00000527881 CYP1A2P05177 515 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 PCSK6P29122 969 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 OLFML1Q6UWY5 402 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 SEPT12Q8IYM1 358 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 NEDD1Q8NHV4 660 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 CPA5Q8WXQ8 436 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 ANO3Q9BYT9 981 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 LIN28AQ9H9Z2 209 aaKnown RBP13.08□□□□□ -0.32
TSKU-203ENST00000527881 DNAJB4Q9UDY4 337 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 KIF13AQ9H1H9 1805 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 USP17L10C9JJH3 530 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 COPEO14579 308 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 TFAP2AP05549 437 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 SRGAP2CP0DJJ0 459 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 SRGAP2BP0DMP2 458 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 RFX1P22670 979 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 RPA1P27694 616 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 MXI1P50539 228 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 MYLK3Q32MK0 819 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 RALGPS1Q5JS13 557 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 GALNT4Q8N4A0 578 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 ALKBH8Q96BT7 664 aaKnown RBP13.08□□□□□ -0.32
TSKU-203ENST00000527881 SLC13A1Q9BZW2 595 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 ZNF395Q9H8N7 513 aaPredicted RBP13.08□□□□□ -0.32
TSKU-203ENST00000527881 ARHGEF4Q9NR80 690 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 HOMER2Q9NSB8 354 aa13.08□□□□□ -0.32
TSKU-203ENST00000527881 LOC100653049A0A140TA62 436 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 E5RJQ4 531 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 KRT34O76011 436 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 GTF2H1P32780 548 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 VAMP7P51809 220 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 FMO1Q01740 532 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
TSKU-203ENST00000527881 FBXL19Q6PCT2 694 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 ANKS1BQ7Z6G8 1248 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 CRLF3Q8IUI8 442 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 GFM2Q969S9 779 aaKnown RBP13.07□□□□□ -0.32
TSKU-203ENST00000527881 JMJD4Q9H9V9 463 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 IFT122Q9HBG6 1241 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 HEMK1Q9Y5R4 338 aaPredicted RBP13.07□□□□□ -0.32
TSKU-203ENST00000527881 TMEM221A6NGB7 291 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 TTLL13PA6NNM8 815 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 H3BSA7 217 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 XPO1O14980 1071 aaKnown RBP13.07□□□□□ -0.32
TSKU-203ENST00000527881 FDFT1P37268 417 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 PTK7Q13308 1070 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 HNRNPDQ14103 355 aaKnown RBP13.07□□□□□ -0.32
TSKU-203ENST00000527881 KLHL38Q2WGJ6 581 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 ASPRV1Q53RT3 343 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 GIPC3Q8TF64 312 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 PPP1R14BQ96C90 147 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 ANLNQ9NQW6 1124 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 GOLGA8IPA6NC78 632 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 GOLGA8JA6NMD2 632 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 ZBTB39O15060 712 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 SORBS2O94875 1100 aaKnown RBP13.07□□□□□ -0.32
TSKU-203ENST00000527881 ATF3P18847 181 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 POLD1P28340 1107 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 SSTR3P32745 418 aaPredicted RBP13.07□□□□□ -0.32
TSKU-203ENST00000527881 PSMD7P51665 324 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 MFAP3P55082 362 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 PPP3CAQ08209 521 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 CHI3L2Q15782 390 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 SYCP2LQ5T4T6 812 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 RINT1Q6NUQ1 792 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 AAGABQ6PD74 315 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 UGT2A3Q6UWM9 527 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 NLRX1Q86UT6 975 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.07□□□□□ -0.32
TSKU-203ENST00000527881 CELF1Q92879 486 aaKnown RBP13.07□□□□□ -0.32
TSKU-203ENST00000527881 ZFRQ96KR1 1074 aaKnown RBP13.07□□□□□ -0.32
TSKU-203ENST00000527881 PACSIN3Q9UKS6 424 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 PCDHA1Q9Y5I3 950 aa13.07□□□□□ -0.32
TSKU-203ENST00000527881 IQANK1A0A1B0GTG1 560 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 TISP43B9A030 160 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 MTA2O94776 668 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 PROCP04070 461 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 CYP11B1P15538 503 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 ZNF24P17028 368 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 VARSP26640 1264 aaKnown RBP13.06□□□□□ -0.32
TSKU-203ENST00000527881 YWHAGP61981 247 aaKnown RBP eCLIP13.06□□□□□ -0.32
TSKU-203ENST00000527881 DYNLT1P63172 113 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 PRKD1Q15139 912 aaPredicted RBP13.06□□□□□ -0.32
TSKU-203ENST00000527881 TLR1Q15399 786 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 BMT2Q1RMZ1 405 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 ARMCX6Q7L4S7 300 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms