RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 FRMD3A2A2Y4 597 aa18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 EXTL3O43909 919 aa18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 PRPF40AO75400 957 aaKnown RBP18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 ITGB3P05106 788 aa18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 IDEP14735 1019 aa18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 RESTQ13127 1097 aa18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 ZNF268Q14587 947 aaPredicted RBP18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CC2D1AQ6P1N0 951 aaPredicted RBP18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TXNDC11Q6PKC3 985 aa18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 PDCL2Q8N4E4 241 aa18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 LRRC27Q9C0I9 530 aa18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 RBM12Q9NTZ6 932 aaKnown RBP18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 GDAP2Q9NXN4 497 aa18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 DDX43Q9NXZ2 648 aaKnown RBP18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 AGAP1Q9UPQ3 857 aa18.81■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 DNAH14Q0VDD8 3507 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CHURC1-FNTBB4DL54 471 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 K7ESF4 209 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 ATG13O75143 517 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 F11P03951 625 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 HMGA1P17096 107 aaKnown RBP18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TGM1P22735 817 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 PCSK1P29120 753 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 LHX1P48742 406 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 FNTBP49356 437 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 RBP5P82980 135 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 KCNA1Q09470 495 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 GRSF1Q12849 480 aaKnown RBP eCLIP18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 SURF1Q15526 300 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 INTS6LQ5JSJ4 861 aaKnown RBP18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 Q6ZS52 159 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 WDR5BQ86VZ2 330 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 GPIHBP1Q8IV16 184 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TOP6BLQ8N6T0 577 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 MAB21L3Q8N8X9 362 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 C1orf127Q8N9H9 656 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 NETO1Q8TDF5 533 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 SAAL1Q96ER3 474 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TRMT2BQ96GJ1 504 aaKnown RBP18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 FUBP3Q96I24 572 aaKnown RBP eCLIP18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 FAM83CQ9BQN1 747 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 ZSCAN16Q9H4T2 348 aaPredicted RBP18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TDP1Q9NUW8 608 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 PANK4Q9NVE7 773 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TBC1D7Q9P0N9 293 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 L1RE1Q9UN81 338 aa18.8■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TMEM191BP0C7N4 346 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 SYT1P21579 422 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 ATXN1P54253 815 aaKnown RBP18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TNK2Q07912 1038 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 SPEM2Q0P670 501 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 MYO1EQ12965 1108 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 RUNX3Q13761 415 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 PDGFRLQ15198 375 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CFAP221Q4G0U5 840 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 DPH6Q7L8W6 267 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 MON1AQ86VX9 555 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CCDC65Q8IXS2 484 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 GPD1LQ8N335 351 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CSGALNACT2Q8N6G5 542 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TTC8Q8TAM2 541 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 INTS4Q96HW7 963 aaKnown RBP18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 ANKRD36BP1Q96IX9 119 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CLIC6Q96NY7 704 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 PI4K2AQ9BTU6 479 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 IKZF4Q9H2S9 585 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 GKN1Q9NS71 199 aa18.79■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CCDC163A0A0D9SF12 145 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 NOL4O94818 638 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 KRT19P08727 400 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 SLC39A14Q15043 492 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 LPAL2Q16609 132 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 WDR44Q5JSH3 913 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CEP68Q76N32 757 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TMEM150AQ86TG1 271 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 SPATA2LQ8IUW3 424 aaPredicted RBP18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 ADGRF2Q8IZF7 708 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 FSIP1Q8NA03 581 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 USP13Q92995 863 aaPredicted RBP18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 MYRFLQ96LU7 910 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CEP295NLQ96MC4 621 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 PARD6AQ9NPB6 346 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 MAGED2Q9UNF1 606 aaPredicted RBP18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 SNX9Q9Y5X1 595 aa18.78■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TRDMT1O14717 391 aaKnown RBP18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 HRO43593 1189 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 PDE6CP51160 858 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CASP5P51878 434 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CSRP2Q16527 193 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TMEM196Q5HYL7 178 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 C4orf50Q6ZRC1 276 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CPA6Q8N4T0 437 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CBWD1Q9BRT8 395 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 SMG9Q9H0W8 520 aaKnown RBP18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TNMDQ9H2S6 317 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 CUEDC2Q9H467 287 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 KIAA1586Q9HCI6 787 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 TMLHEQ9NVH6 421 aa18.77■□□□□ 0.6
CKLF-CMTM1-202ENST00000527845 RALGAPA1Q6GYQ0 2036 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms