RNA–Protein interactions for RNA: ENST00000526825.5

LTBP3-206, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-206ENST00000526825 SYNPOQ8N3V7 929 aa16.2■□□□□ 0.18
LTBP3-206ENST00000526825 GLIS3Q8NEA6 775 aa16.2■□□□□ 0.18
LTBP3-206ENST00000526825 CXorf38Q8TB03 319 aa16.2■□□□□ 0.18
LTBP3-206ENST00000526825 HPS3Q969F9 1004 aa16.2■□□□□ 0.18
LTBP3-206ENST00000526825 SMG9Q9H0W8 520 aaKnown RBP16.2■□□□□ 0.18
LTBP3-206ENST00000526825 GKN1Q9NS71 199 aa16.2■□□□□ 0.18
LTBP3-206ENST00000526825 SEL1LQ9UBV2 794 aa16.2■□□□□ 0.18
LTBP3-206ENST00000526825 ZMYM5Q9UJ78 669 aa16.2■□□□□ 0.18
LTBP3-206ENST00000526825 RAB23Q9ULC3 237 aa16.2■□□□□ 0.18
LTBP3-206ENST00000526825 SOBPA7XYQ1 873 aa16.19■□□□□ 0.18
LTBP3-206ENST00000526825 IDEP14735 1019 aa16.19■□□□□ 0.18
LTBP3-206ENST00000526825 NLRP12P59046 1061 aa16.19■□□□□ 0.18
LTBP3-206ENST00000526825 SPEM2Q0P670 501 aa16.19■□□□□ 0.18
LTBP3-206ENST00000526825 SRSF5Q13243 272 aaKnown RBP16.19■□□□□ 0.18
LTBP3-206ENST00000526825 SIM2Q14190 667 aaPredicted RBP16.19■□□□□ 0.18
LTBP3-206ENST00000526825 E2F4Q16254 413 aa16.19■□□□□ 0.18
LTBP3-206ENST00000526825 ITPRIPL2Q3MIP1 535 aa16.19■□□□□ 0.18
LTBP3-206ENST00000526825 SV2CQ496J9 727 aa16.19■□□□□ 0.18
LTBP3-206ENST00000526825 FAM84AQ96KN4 292 aa16.19■□□□□ 0.18
LTBP3-206ENST00000526825 ZNF396Q96N95 335 aaPredicted RBP16.19■□□□□ 0.18
LTBP3-206ENST00000526825 MRPL44Q9H9J2 332 aaKnown RBP16.19■□□□□ 0.18
LTBP3-206ENST00000526825 THG1LQ9NWX6 298 aaKnown RBP16.19■□□□□ 0.18
LTBP3-206ENST00000526825 PCDHB5Q9Y5E4 795 aa16.19■□□□□ 0.18
LTBP3-206ENST00000526825 TSC2P49815 1807 aa16.19■□□□□ 0.18
LTBP3-206ENST00000526825 NUP210Q8TEM1 1887 aaPredicted RBP16.18■□□□□ 0.18
LTBP3-206ENST00000526825 OTOL1A6NHN0 477 aaPredicted RBP16.18■□□□□ 0.18
LTBP3-206ENST00000526825 LRP3O75074 770 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 GAP43P17677 238 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 CASP1P29466 404 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 DNM1Q05193 864 aaKnown RBP16.18■□□□□ 0.18
LTBP3-206ENST00000526825 TAF12Q16514 161 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 L1TD1Q5T7N2 865 aaKnown RBP16.18■□□□□ 0.18
LTBP3-206ENST00000526825 CCDC73Q6ZRK6 1079 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 PRR23BQ6ZRT6 265 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 BRSK2Q8IWQ3 736 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 C1orf127Q8N9H9 656 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 USP13Q92995 863 aaPredicted RBP16.18■□□□□ 0.18
LTBP3-206ENST00000526825 DHX58Q96C10 678 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 CHFRQ96EP1 664 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 GCNAQ96QF7 691 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 ACCSQ96QU6 501 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 ACBD6Q9BR61 282 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 FAM213AQ9BRX8 229 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 RTKNQ9BST9 563 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 HPS4Q9NQG7 708 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 ABI2Q9NYB9 513 aaPredicted RBP16.18■□□□□ 0.18
LTBP3-206ENST00000526825 AGAP1Q9UPQ3 857 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 EXOC7Q9UPT5 735 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 CCL26Q9Y258 94 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 ZDHHC9Q9Y397 364 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 ATG2BQ96BY7 2078 aa16.18■□□□□ 0.18
LTBP3-206ENST00000526825 DCDC2BA2VCK2 349 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 PPP6R2O75170 966 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 PRPF40AO75400 957 aaKnown RBP16.17■□□□□ 0.18
LTBP3-206ENST00000526825 YEATS4O95619 227 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 LDHAP00338 332 aaKnown RBP16.17■□□□□ 0.18
LTBP3-206ENST00000526825 GARTP22102 1010 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 DDX6P26196 483 aaKnown RBP eCLIP16.17■□□□□ 0.18
LTBP3-206ENST00000526825 POLR2BP30876 1174 aaKnown RBP16.17■□□□□ 0.18
LTBP3-206ENST00000526825 PNPLA4P41247 253 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 GPR15P49685 360 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 RUNX3Q13761 415 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 NFE2Q16621 373 aaPredicted RBP16.17■□□□□ 0.18
LTBP3-206ENST00000526825 TXNDC8Q6A555 127 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 HEATR6Q6AI08 1181 aaKnown RBP16.17■□□□□ 0.18
LTBP3-206ENST00000526825 MON1AQ86VX9 555 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 PDCL2Q8N4E4 241 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 MAB21L3Q8N8X9 362 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 SAAL1Q96ER3 474 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 ZNF560Q96MR9 790 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 PKMYT1Q99640 499 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 PI4K2AQ9BTU6 479 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 OLFML3Q9NRN5 406 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 SEMA4GQ9NTN9 838 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 PANK4Q9NVE7 773 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 CDV3Q9UKY7 258 aaKnown RBP16.17■□□□□ 0.18
LTBP3-206ENST00000526825 L1RE1Q9UN81 338 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 PCDHB13Q9Y5F0 798 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.17■□□□□ 0.18
LTBP3-206ENST00000526825 CNOT1A5YKK6 2376 aaKnown RBP16.17■□□□□ 0.18
LTBP3-206ENST00000526825 DENND4CQ5VZ89 1909 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 ACACBO00763 2458 aa16.17■□□□□ 0.18
LTBP3-206ENST00000526825 TCHHQ07283 1943 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.16■□□□□ 0.18
LTBP3-206ENST00000526825 FRMD3A2A2Y4 597 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 TRDMT1O14717 391 aaKnown RBP16.16■□□□□ 0.18
LTBP3-206ENST00000526825 EXTL3O43909 919 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 CUTAO60888 179 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 GCNT3O95395 438 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 ITGB3P05106 788 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 CSH1P0DML2 217 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 CSH2P0DML3 217 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 AVPR1AP37288 418 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 TFAMQ00059 246 aaKnown RBP16.16■□□□□ 0.18
LTBP3-206ENST00000526825 TSPY1Q01534 308 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 DDR2Q16832 855 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 TMEM196Q5HYL7 178 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 SDHAF4Q5VUM1 108 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 PKN3Q6P5Z2 889 aa16.16■□□□□ 0.18
LTBP3-206ENST00000526825 WDR5BQ86VZ2 330 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms