RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 TUFMP49411 452 aaKnown RBP12.66□□□□□ -0.38
CAPN1-204ENST00000526468 BFSP1Q12934 665 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 CCINQ13939 588 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 ITPRIPL2Q3MIP1 535 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 SV2CQ496J9 727 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 THEM5Q8N1Q8 247 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 FAM160A2Q8N612 972 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-204ENST00000526468 STKLD1Q8NE28 680 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 LARP4BQ92615 738 aaKnown RBP12.66□□□□□ -0.38
CAPN1-204ENST00000526468 LRRC3BQ96PB8 259 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 BLOC1S4Q9NUP1 217 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 THG1LQ9NWX6 298 aaKnown RBP12.66□□□□□ -0.38
CAPN1-204ENST00000526468 C2CD2Q9Y426 696 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 IGF2RP11717 2491 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 PIRO00625 290 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 CYB561D2O14569 222 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 HRO43593 1189 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 ADRB2P07550 413 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 ADRB1P08588 477 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 PAX3P23760 479 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 TSPY1Q01534 308 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 CSRP2Q16527 193 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 AASDHQ4L235 1098 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-204ENST00000526468 ZC2HC1CQ53FD0 456 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-204ENST00000526468 WSCD1Q658N2 575 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 SFR1Q86XK3 245 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 EFCAB13Q8IY85 973 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 TTC16Q8NEE8 873 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 SPPL2BQ8TCT7 592 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 C2orf15Q8WU43 125 aaKnown RBP12.65□□□□□ -0.38
CAPN1-204ENST00000526468 POMGNT1Q8WZA1 660 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 TMX3Q96JJ7 454 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 ASB7Q9H672 318 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 IL21Q9HBE4 155 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 DPP3Q9NY33 737 aa12.65□□□□□ -0.38
CAPN1-204ENST00000526468 AGO2Q9UKV8 859 aaKnown RBP12.65□□□□□ -0.38
CAPN1-204ENST00000526468 ANO9A1A5B4 782 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 ANKRD63C9JTQ0 380 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 LETM1O95202 739 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-204ENST00000526468 BMP15O95972 392 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 CCDC192P0DO97 292 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 HOXC13P31276 330 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 GTF2BQ00403 316 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 GRIN1Q05586 938 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 TRIM68Q6AZZ1 485 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 PKN3Q6P5Z2 889 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 WDR5BQ86VZ2 330 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 SYNPOQ8N3V7 929 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 C12orf50Q8NA57 414 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-204ENST00000526468 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 EBF3Q9H4W6 596 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 MAGED2Q9UNF1 606 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-204ENST00000526468 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 CCL26Q9Y258 94 aa12.64□□□□□ -0.39
CAPN1-204ENST00000526468 TP53BP1Q12888 1972 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 CACNA1GO43497 2377 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 EXTL3O43909 919 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 GDF9O60383 454 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 FOXD2O60548 495 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 RPP40O75818 363 aaKnown RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 IL18RAPO95256 599 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 CD2BP2O95400 341 aaKnown RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 HAPLN1P10915 354 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 WEE1P30291 646 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 POLR2BP30876 1174 aaKnown RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 LONP1P36776 959 aaKnown RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 PXNP49023 591 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 GPR15P49685 360 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 NLRP12P59046 1061 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 SMARCB1Q12824 385 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 GRSF1Q12849 480 aaKnown RBP eCLIP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 PTPAQ15257 358 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 CCDC6Q16204 474 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 IL31Q6EBC2 164 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 SLFN12LQ6IEE8 588 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 CC2D1AQ6P1N0 951 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 DCP1BQ8IZD4 617 aaKnown RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 CMTM8Q8IZV2 173 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 MAB21L3Q8N8X9 362 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 KRI1Q8N9T8 703 aaKnown RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 NOC3LQ8WTT2 800 aaKnown RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 MRPS31Q92665 395 aaKnown RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 HVCN1Q96D96 273 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 SLC46A2Q9BY10 475 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 GTPBP4Q9BZE4 634 aaKnown RBP12.63□□□□□ -0.39
CAPN1-204ENST00000526468 CCSER1Q9C0I3 900 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 IKZF4Q9H2S9 585 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 KIF9Q9HAQ2 790 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 HPS4Q9NQG7 708 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 ZMYM5Q9UJ78 669 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 SLC8A2Q9UPR5 921 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 PCDHB5Q9Y5E4 795 aa12.63□□□□□ -0.39
CAPN1-204ENST00000526468 KPNA7A9QM74 516 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 RNF40O75150 1001 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 PRPF40AO75400 957 aaKnown RBP12.62□□□□□ -0.39
CAPN1-204ENST00000526468 KRT37O76014 449 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 KIF20AO95235 890 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 ARSAP15289 507 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 DDX6P26196 483 aaKnown RBP eCLIP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms