RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 RAC3P60763 192 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 CNTN2Q02246 1040 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 GRM4Q14833 912 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 SLC35G1Q2M3R5 365 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 QRICH1Q2TAL8 776 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 ZMAT1Q5H9K5 638 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 ZC3H12BQ5HYM0 836 aaKnown RBP5.94□□□□□ -1.46
SVIP-202ENST00000525670 SPDYAQ5MJ70 313 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 CATIPQ7Z7H3 387 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 FAM160B2Q86V87 743 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 TICAM2Q86XR7 235 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 ADGRF4Q8IZF3 695 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 ANKRD35Q8N283 1001 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 PRPF38AQ8NAV1 312 aaKnown RBP5.94□□□□□ -1.46
SVIP-202ENST00000525670 SOCS4Q8WXH5 440 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 ZNF333Q96JL9 665 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 SCYL1Q96KG9 808 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 EXOC2Q96KP1 924 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 DEFB118Q96PH6 123 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 PIGSQ96S52 555 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 SCAND2PQ9GZW5 306 aaPredicted RBP5.94□□□□□ -1.46
SVIP-202ENST00000525670 SLC38A10Q9HBR0 1119 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 TCP11L1Q9NUJ3 509 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 GALNT8Q9NY28 637 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 HOXC10Q9NYD6 342 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 MAD2L2Q9UI95 211 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 ZHX1Q9UKY1 873 aaPredicted RBP5.94□□□□□ -1.46
SVIP-202ENST00000525670 PCDHA9Q9Y5H5 950 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 CCDC66A2RUB6 948 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 KLRF2D3W0D1 207 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 CYR61O00622 381 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 CRTAMO95727 393 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 C4BPAP04003 597 aaKnown RBP5.93□□□□□ -1.46
SVIP-202ENST00000525670 HMGCRP04035 888 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 FCER1AP12319 257 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 AOAHP28039 575 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 HSPA4P34932 840 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 ETV4P43268 484 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 UBXN2AP68543 259 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 CCT2P78371 535 aaKnown RBP5.93□□□□□ -1.46
SVIP-202ENST00000525670 GRB14Q14449 540 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 KCTD2Q14681 263 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 ARHGEF6Q15052 776 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 PRKD1Q15139 912 aaPredicted RBP5.93□□□□□ -1.46
SVIP-202ENST00000525670 ASPRV1Q53RT3 343 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 BLOC1S2Q6QNY1 142 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 USP51Q70EK9 711 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 DGKHQ86XP1 1220 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 ZC3H7AQ8IWR0 971 aaKnown RBP5.93□□□□□ -1.46
SVIP-202ENST00000525670 FBXO16Q8IX29 292 aaPredicted RBP5.93□□□□□ -1.46
SVIP-202ENST00000525670 MB21D1Q8N884 522 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 CTCFLQ8NI51 663 aaPredicted RBP5.93□□□□□ -1.46
SVIP-202ENST00000525670 DIS3LQ8TF46 1054 aaKnown RBP5.93□□□□□ -1.46
SVIP-202ENST00000525670 CHURC1Q8WUH1 139 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 ZDHHC5Q9C0B5 715 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.93□□□□□ -1.46
SVIP-202ENST00000525670 RANBP17Q9H2T7 1088 aaKnown RBP5.93□□□□□ -1.46
SVIP-202ENST00000525670 ACAD9Q9H845 621 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 JMJD4Q9H9V9 463 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 NCOA5Q9HCD5 579 aaKnown RBP5.93□□□□□ -1.46
SVIP-202ENST00000525670 SMURF1Q9HCE7 757 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 A1CFQ9NQ94 594 aaKnown RBP5.93□□□□□ -1.46
SVIP-202ENST00000525670 FBXO10Q9UK96 956 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 GJD2Q9UKL4 321 aa5.93□□□□□ -1.46
SVIP-202ENST00000525670 MRPS23Q9Y3D9 190 aaKnown RBP5.93□□□□□ -1.46
SVIP-202ENST00000525670 PRAMEF25A6NGN4 478 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 SLC15A5A6NIM6 579 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 CYTH3O43739 400 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 ICAM1P05362 532 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 SNHG28P0DPA3 235 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 CR2P20023 1033 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 RPS6KB1P23443 525 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 HOXA13P31271 388 aaPredicted RBP5.92□□□□□ -1.46
SVIP-202ENST00000525670 NOVP48745 357 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 DNM2P50570 870 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 METAP2P50579 478 aaKnown RBP eCLIP5.92□□□□□ -1.46
SVIP-202ENST00000525670 IL13RA1P78552 427 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 BAATQ14032 418 aaPredicted RBP5.92□□□□□ -1.46
SVIP-202ENST00000525670 STILQ15468 1287 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 PKN2Q16513 984 aaKnown RBP5.92□□□□□ -1.46
SVIP-202ENST00000525670 RNF151Q2KHN1 245 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 CCDC178Q5BJE1 867 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 GPATCH4Q5T3I0 446 aaKnown RBP5.92□□□□□ -1.46
SVIP-202ENST00000525670 GJC2Q5T442 439 aaPredicted RBP5.92□□□□□ -1.46
SVIP-202ENST00000525670 APOA5Q6Q788 366 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 HEATR3Q7Z4Q2 680 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 TRPV1Q8NER1 839 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 TBC1D5Q92609 795 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 EDAQ92838 391 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 ARMC5Q96C12 935 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 MAML3Q96JK9 1138 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 BTBD2Q9BX70 525 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 MROH8Q9H579 483 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 OAZ3Q9UMX2 235 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 ASTN1O14525 1302 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 DOCK5Q9H7D0 1870 aa5.92□□□□□ -1.46
SVIP-202ENST00000525670 CEP290O15078 2479 aa5.91□□□□□ -1.46
SVIP-202ENST00000525670 ZBTB43O43298 467 aa5.91□□□□□ -1.46
SVIP-202ENST00000525670 EFCAB14O75071 495 aa5.91□□□□□ -1.46
SVIP-202ENST00000525670 LARGE1O95461 756 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms