RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TMEM191CA6NGB0 347 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 CYB561D2O14569 222 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 NDC80O14777 642 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 MEFVO15553 781 aaPredicted RBP10.54□□□□□ -0.72
VPS13B-212ENST00000524330 ZRANB2O95218 330 aaKnown RBP eCLIP10.54□□□□□ -0.72
VPS13B-212ENST00000524330 KRT7P08729 469 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 CAPN2P17655 700 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 TNFRSF8P28908 595 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 PCSK1P29120 753 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 CHRNA3P32297 505 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 GABRB2P47870 512 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 COPS2P61201 443 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 CUL1Q13616 776 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 SMC1AQ14683 1233 aaKnown RBP10.54□□□□□ -0.72
VPS13B-212ENST00000524330 LPIN1Q14693 890 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 GOLGA7BQ2TAP0 167 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 CC2D1AQ6P1N0 951 aaPredicted RBP10.54□□□□□ -0.72
VPS13B-212ENST00000524330 GLB1LQ6UWU2 654 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 RCOR2Q8IZ40 523 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 ADGRF2Q8IZF7 708 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 CRYBG2Q8N1P7 616 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 NIPA2Q8N8Q9 360 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 SLC43A3Q8NBI5 491 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 WHAMMQ8TF30 809 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 GRK7Q8WTQ7 553 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 TFAP2BQ92481 460 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 APBB2Q92870 758 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 PPP1R10Q96QC0 940 aaKnown RBP10.54□□□□□ -0.72
VPS13B-212ENST00000524330 GAD1Q99259 594 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 KRT12Q99456 494 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 ADAM2Q99965 735 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 RNF39Q9H2S5 420 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 GOLPH3Q9H4A6 298 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 ST7Q9NRC1 585 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 RBM12Q9NTZ6 932 aaKnown RBP10.54□□□□□ -0.72
VPS13B-212ENST00000524330 TMEM59LQ9UK28 342 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 TSPAN16Q9UKR8 245 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 UTP11Q9Y3A2 253 aaKnown RBP10.54□□□□□ -0.72
VPS13B-212ENST00000524330 PTCH2Q9Y6C5 1203 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 GRIN2DO15399 1336 aa10.54□□□□□ -0.72
VPS13B-212ENST00000524330 PDCD11Q14690 1871 aaKnown RBP10.53□□□□□ -0.72
VPS13B-212ENST00000524330 GOLGA8SH3BPF8 625 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 PODXLO00592 558 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 HOXA2O43364 376 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 RRP9O43818 475 aaKnown RBP10.53□□□□□ -0.72
VPS13B-212ENST00000524330 CALCAP01258 141 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 ERBB2P04626 1255 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 ODC1P11926 461 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 CKBP12277 381 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 SELPP16109 830 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 PSMA2P25787 234 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 RDXP35241 583 aaKnown RBP10.53□□□□□ -0.72
VPS13B-212ENST00000524330 SCNN1AP37088 669 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 MLH1P40692 756 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 EPHB4P54760 987 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 LILRA4P59901 499 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 RNASE9P60153 205 aaKnown RBP10.53□□□□□ -0.72
VPS13B-212ENST00000524330 LMNB2Q03252 620 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 BST2Q10589 180 aaKnown RBP10.53□□□□□ -0.72
VPS13B-212ENST00000524330 PDCLQ13371 301 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 DSC3Q14574 896 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 PTPROQ16827 1216 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 TRIM71Q2Q1W2 868 aaKnown RBP10.53□□□□□ -0.72
VPS13B-212ENST00000524330 ZNF618Q5T7W0 954 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 LHX8Q68G74 356 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 OR6B2Q6IFH4 312 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 SLC24A5Q71RS6 500 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 ACOT1Q86TX2 421 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 CCDC50Q8IVM0 306 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 KLHL7Q8IXQ5 586 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 KATNAL2Q8IYT4 538 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 THEM5Q8N1Q8 247 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 GOLGA6L1Q8N7Z2 621 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 ANKRD52Q8NB46 1076 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 RNF169Q8NCN4 708 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 EXD1Q8NHP7 514 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 CD101Q93033 1021 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 PKNOX2Q96KN3 472 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 HSFY1Q96LI6 401 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 MCEEQ96PE7 176 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 FAM193BQ96PV7 902 aaPredicted RBP10.53□□□□□ -0.72
VPS13B-212ENST00000524330 MRPL45Q9BRJ2 306 aaKnown RBP10.53□□□□□ -0.72
VPS13B-212ENST00000524330 LRRC1Q9BTT6 524 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 FAM114A2Q9NRY5 505 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 RGS18Q9NS28 235 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 TRMT13Q9NUP7 481 aaKnown RBP10.53□□□□□ -0.72
VPS13B-212ENST00000524330 USTQ9Y2C2 406 aa10.53□□□□□ -0.72
VPS13B-212ENST00000524330 ARL5CA6NH57 179 aa10.52□□□□□ -0.73
VPS13B-212ENST00000524330 PTGESO14684 152 aa10.52□□□□□ -0.73
VPS13B-212ENST00000524330 SART1O43290 800 aaKnown RBP10.52□□□□□ -0.73
VPS13B-212ENST00000524330 PHF2O75151 1096 aa10.52□□□□□ -0.73
VPS13B-212ENST00000524330 HEXIM1O94992 359 aaKnown RBP10.52□□□□□ -0.73
VPS13B-212ENST00000524330 SSTR3P32745 418 aaPredicted RBP10.52□□□□□ -0.73
VPS13B-212ENST00000524330 GPD2P43304 727 aa10.52□□□□□ -0.73
VPS13B-212ENST00000524330 TNNT3P45378 269 aaPredicted RBP10.52□□□□□ -0.73
VPS13B-212ENST00000524330 FNTAP49354 379 aa10.52□□□□□ -0.73
VPS13B-212ENST00000524330 PEX5P50542 639 aa10.52□□□□□ -0.73
VPS13B-212ENST00000524330 VSNL1P62760 191 aa10.52□□□□□ -0.73
VPS13B-212ENST00000524330 NNTQ13423 1086 aa10.52□□□□□ -0.73
VPS13B-212ENST00000524330 TUSC3Q13454 348 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms