RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 SPATA2LQ8IUW3 424 aaPredicted RBP13.38□□□□□ -0.27
CCNC-216ENST00000523961 ZDHHC14Q8IZN3 488 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 TTC9BQ8N6N2 239 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 LEMD2Q8NC56 503 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 ELMO3Q96BJ8 720 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 FUBP3Q96I24 572 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCNC-216ENST00000523961 FAXDC2Q96IV6 333 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 PKMYT1Q99640 499 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 SEPT5Q99719 369 aaPredicted RBP13.38□□□□□ -0.27
CCNC-216ENST00000523961 NIF3L1Q9GZT8 377 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 CYP3A43Q9HB55 503 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 ABCB6Q9NP58 842 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 AVENQ9NQS1 362 aaPredicted RBP13.38□□□□□ -0.27
CCNC-216ENST00000523961 TMLHEQ9NVH6 421 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 HCFC1R1Q9NWW0 138 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 CEP72Q9P209 647 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 COQ4Q9Y3A0 265 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 ASB3Q9Y575 518 aa13.38□□□□□ -0.27
CCNC-216ENST00000523961 SPTBN5Q9NRC6 3674 aaKnown RBP13.37□□□□□ -0.27
CCNC-216ENST00000523961 MYBPHLA2RUH7 354 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 ZNF197O14709 1029 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 PMM2O15305 246 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 ATP2C2O75185 946 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 RHOP08100 348 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 GBP2P32456 591 aaPredicted RBP13.37□□□□□ -0.27
CCNC-216ENST00000523961 ASPAP45381 313 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 RAP1GAPP47736 663 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 FMO5P49326 533 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 CDH8P55286 799 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 PSMC1P62191 440 aaKnown RBP13.37□□□□□ -0.27
CCNC-216ENST00000523961 CETN1Q12798 172 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 VEPH1Q14D04 833 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 CFAP221Q4G0U5 840 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 CYP4A22Q5TCH4 519 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 SASS6Q6UVJ0 657 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 GET4Q7L5D6 327 aaPredicted RBP13.37□□□□□ -0.27
CCNC-216ENST00000523961 ITIH5Q86UX2 942 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 RNF135Q8IUD6 432 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 TRIM59Q8IWR1 403 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 MYCBPAPQ8TBZ2 947 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 SEMA4DQ92854 862 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 TNIP3Q96KP6 325 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 MED15Q96RN5 788 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 CORO1BQ9BR76 489 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 BCO2Q9BYV7 579 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 SDCBP2Q9H190 292 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 APOBEC3GQ9HC16 384 aaKnown RBP13.37□□□□□ -0.27
CCNC-216ENST00000523961 CRTAC1Q9NQ79 661 aa13.37□□□□□ -0.27
CCNC-216ENST00000523961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.37□□□□□ -0.273e-11■■■■■ 99.4
CCNC-216ENST00000523961 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCNC-216ENST00000523961 ZFP37Q9Y6Q3 630 aaPredicted RBP13.37□□□□□ -0.27
CCNC-216ENST00000523961 DENND4AQ7Z401 1863 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 P4HA2O15460 535 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 SOAT2O75908 522 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 PTPN1P18031 435 aaKnown RBP13.36□□□□□ -0.27
CCNC-216ENST00000523961 TRIM21P19474 475 aaKnown RBP13.36□□□□□ -0.27
CCNC-216ENST00000523961 PTMSP20962 102 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 MAGEA11P43364 429 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 CDR1P51861 262 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 EPHA5P54756 1037 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 RPL10AP62906 217 aaKnown RBP13.36□□□□□ -0.27
CCNC-216ENST00000523961 PDZD4Q76G19 769 aaPredicted RBP13.36□□□□□ -0.27
CCNC-216ENST00000523961 UNC93AQ86WB7 457 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 FAM114A1Q8IWE2 563 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 B3GALNT2Q8NCR0 500 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 FAM200AQ8TCP9 573 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 MYLPFQ96A32 169 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 CNOT6LQ96LI5 555 aaKnown RBP13.36□□□□□ -0.27
CCNC-216ENST00000523961 MYADMQ96S97 322 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 DNAI2Q9GZS0 605 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 DNAJC25Q9H1X3 360 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 ANO10Q9NW15 660 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 EPS15L1Q9UBC2 864 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 MAGEC2Q9UBF1 373 aaPredicted RBP13.36□□□□□ -0.27
CCNC-216ENST00000523961 CDH7Q9ULB5 785 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 MRPS23Q9Y3D9 190 aaKnown RBP13.36□□□□□ -0.27
CCNC-216ENST00000523961 NME7Q9Y5B8 376 aa13.36□□□□□ -0.27
CCNC-216ENST00000523961 CUL9Q8IWT3 2517 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 LRRN2O75325 713 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 MICAL2O94851 1124 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 AFPP02771 609 aaKnown RBP13.35□□□□□ -0.27
CCNC-216ENST00000523961 ATF6P18850 670 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 CYP2F1P24903 491 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 NDST1P52848 882 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 CYP27A1Q02318 531 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 INCA1Q0VD86 236 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 KCNH2Q12809 1159 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 TAF12Q16514 161 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 CCDC142Q17RM4 750 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 VSTM1Q6UX27 236 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 DNAJB7Q7Z6W7 309 aaPredicted RBP13.35□□□□□ -0.27
CCNC-216ENST00000523961 CREBRFQ8IUR6 639 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 TTC39CQ8N584 583 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 ITFG1Q8TB96 612 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 PSMG2Q969U7 264 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 PCED1BQ96HM7 432 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 DPEP3Q9H4B8 488 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms