RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 L1RE1Q9UN81 338 aa11.01□□□□□ -0.65
CTNNA1-235ENST00000522730 NCANO14594 1321 aa11.01□□□□□ -0.65
CTNNA1-235ENST00000522730 SCN1AP35498 2009 aa11.01□□□□□ -0.65
CTNNA1-235ENST00000522730 KINO60870 393 aaKnown RBP11□□□□□ -0.65
CTNNA1-235ENST00000522730 YEATS4O95619 227 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 TNNC2P02585 160 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 PDGFRBP09619 1106 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 DLATP10515 647 aaKnown RBP11□□□□□ -0.65
CTNNA1-235ENST00000522730 TNNI1P19237 187 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 MYO1EQ12965 1108 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 FZD5Q13467 585 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 E2F4Q16254 413 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 DUOXA2Q1HG44 320 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 SPATA2LQ8IUW3 424 aaPredicted RBP11□□□□□ -0.65
CTNNA1-235ENST00000522730 SCN4BQ8IWT1 228 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 OR5B17Q8NGF7 314 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 C2orf15Q8WU43 125 aaKnown RBP11□□□□□ -0.65
CTNNA1-235ENST00000522730 CCDC127Q96BQ5 260 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 HPDLQ96IR7 371 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 MMS19Q96T76 1030 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 TRIM9Q9C026 710 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 CUEDC2Q9H467 287 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 TASP1Q9H6P5 420 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 INTS13Q9NVM9 706 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 KBTBD4Q9NVX7 518 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 GTSE1Q9NYZ3 720 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 HSFX1Q9UBD0 423 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 SIX4Q9UIU6 781 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 FBXO4Q9UKT5 387 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 ITGA11Q9UKX5 1188 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 PCDHA7Q9UN72 937 aa11□□□□□ -0.65
CTNNA1-235ENST00000522730 SHISA7A6NL88 538 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 HAX1O00165 279 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 CHADO15335 359 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 ATP2C2O75185 946 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 PRAMEF12O95522 483 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 F13A1P00488 732 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 CDC25CP30307 473 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 HOXD13P35453 343 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 AVPR1AP37288 418 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 MAGEA9P43362 315 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 RPS9P46781 194 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 DNM1Q05193 864 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 TNK2Q07912 1038 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 SMARCB1Q12824 385 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 PKP1Q13835 747 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 NFE2Q16621 373 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 CCDC142Q17RM4 750 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 FAM26FQ5R3K3 315 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 TXNDC8Q6A555 127 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 OSTM1Q86WC4 334 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 GRAMD1CQ8IYS0 662 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 ADGRF2Q8IZF7 708 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 TMEM86AQ8N2M4 240 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 LRRC52Q8N7C0 313 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 ZNF507Q8TCN5 953 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 BPIFB1Q8TDL5 484 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 C7orf25Q9BPX7 421 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 ACBD6Q9BR61 282 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 MKNK1Q9BUB5 465 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 IL21Q9HBE4 155 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 TRPC7Q9HCX4 862 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 SLC39A2Q9NP94 309 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 TRPV5Q9NQA5 729 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 GKN1Q9NS71 199 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 RBM12Q9NTZ6 932 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 THG1LQ9NWX6 298 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 MORC2Q9Y6X9 1032 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 PTPRJQ12913 1337 aa10.99□□□□□ -0.65
CTNNA1-235ENST00000522730 ANK1P16157 1881 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 MYBPHLA2RUH7 354 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 SPECC1L-ADORA2AF8WAN1 911 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 KIAA0391O15091 583 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 CSH1P0DML2 217 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 CSH2P0DML3 217 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 LMO2P25791 158 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 LHX1P48742 406 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 NLRP12P59046 1061 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 PSMC1P62191 440 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 RPL10AP62906 217 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 CYP27A1Q02318 531 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 FCHO2Q0JRZ9 810 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 CUL4BQ13620 913 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 PON2Q15165 354 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 SURF1Q15526 300 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 SNRNP35Q16560 246 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 LPAL2Q16609 132 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 SOWAHAQ2M3V2 549 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 ZNF528Q3MIS6 628 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 ARHGAP29Q52LW3 1261 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 INTS6LQ5JSJ4 861 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 CEP57L1Q8IYX8 460 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 CMTM8Q8IZV2 173 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 CELF5Q8N6W0 485 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 RUBCNQ92622 972 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 MRPS31Q92665 395 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 FNBP1Q96RU3 617 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 C8orf33Q9H7E9 229 aaPredicted RBP10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 KIAA1586Q9HCI6 787 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 ZSCAN32Q9NX65 697 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms