RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 MTMR3Q13615 1198 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 STXBP5Q5T5C0 1151 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 DPH6Q7L8W6 267 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 DCP1BQ8IZD4 617 aaKnown RBP19.11■□□□□ 0.65
CLK4-211ENST00000522556 OR6B3Q8NGW1 331 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 SHKBP1Q8TBC3 707 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 SEMA4DQ92854 862 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 SYAP1Q96A49 352 aaPredicted RBP19.11■□□□□ 0.65
CLK4-211ENST00000522556 ASIC4Q96FT7 647 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 ZNF512Q96ME7 567 aaPredicted RBP19.11■□□□□ 0.65
CLK4-211ENST00000522556 ZSWIM3Q96MP5 696 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 TSG101Q99816 390 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 MKNK1Q9BUB5 465 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 CLSTN2Q9H4D0 955 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 VRTNQ9H8Y1 702 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLK4-211ENST00000522556 KIAA1468Q9P260 1216 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 PCDHB5Q9Y5E4 795 aa19.11■□□□□ 0.65
CLK4-211ENST00000522556 DENND4CQ5VZ89 1909 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 ANHXE9PGG2 379 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 PSMA7O14818 248 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 IKBKBO14920 756 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 TACC1O75410 805 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 ASS1P00966 412 aaKnown RBP19.1■□□□□ 0.65
CLK4-211ENST00000522556 ATICP31939 592 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 ALDH1A3P47895 512 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 AP3M2P53677 418 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 LRRC63Q05C16 580 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 TEAD2Q15562 447 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 ZNF667Q5HYK9 610 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 TMEM31Q5JXX7 168 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 FAM171BQ6P995 826 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 TRIM67Q6ZTA4 783 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 HFE2Q6ZVN8 426 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 GAREM2Q75VX8 874 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 PDZD4Q76G19 769 aaPredicted RBP19.1■□□□□ 0.65
CLK4-211ENST00000522556 DNAJB7Q7Z6W7 309 aaPredicted RBP19.1■□□□□ 0.65
CLK4-211ENST00000522556 SPATA18Q8TC71 538 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 SPPL2BQ8TCT7 592 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 MED15Q96RN5 788 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 KXD1Q9BQD3 176 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 C1QTNF1Q9BXJ1 281 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 AVENQ9NQS1 362 aaPredicted RBP19.1■□□□□ 0.65
CLK4-211ENST00000522556 TMEM30AQ9NV96 361 aa19.1■□□□□ 0.65
CLK4-211ENST00000522556 A0A1W2PRU2 124 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 GPR37L1O60883 481 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 PCSK1P29120 753 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 ASPAP45381 313 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 CACNA2D1P54289 1103 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 EPHB3P54753 998 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 MCCD1P59942 119 aaPredicted RBP19.09■□□□□ 0.65
CLK4-211ENST00000522556 FKBP3Q00688 224 aaKnown RBP19.09■□□□□ 0.65
CLK4-211ENST00000522556 PLD1Q13393 1074 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 DDR2Q16832 855 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 CBWD6Q4V339 395 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 DCAF17Q5H9S7 520 aaPredicted RBP19.09■□□□□ 0.65
CLK4-211ENST00000522556 MDH1BQ5I0G3 518 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 CBWD3Q5JTY5 395 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 CBWD5Q5RIA9 395 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 IQCEQ6IPM2 695 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 ELMOD1Q8N336 334 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 GPT2Q8TD30 523 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 PSMG2Q969U7 264 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 PCED1BQ96HM7 432 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 DHTKD1Q96HY7 919 aaPredicted RBP19.09■□□□□ 0.65
CLK4-211ENST00000522556 PLA2G2FQ9BZM2 168 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 SNX25Q9H3E2 840 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 IL21Q9HBE4 155 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 ASAH2Q9NR71 780 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 CDH9Q9ULB4 789 aa19.09■□□□□ 0.65
CLK4-211ENST00000522556 TMEM221A6NGB7 291 aa19.08■□□□□ 0.64
CLK4-211ENST00000522556 M0R296 226 aa19.08■□□□□ 0.64
CLK4-211ENST00000522556 FCARP24071 287 aa19.08■□□□□ 0.64
CLK4-211ENST00000522556 GNL1P36915 607 aaPredicted RBP19.08■□□□□ 0.64
CLK4-211ENST00000522556 NOP14P78316 857 aaKnown RBP19.08■□□□□ 0.64
CLK4-211ENST00000522556 CYP4F8P98187 520 aa19.08■□□□□ 0.64
CLK4-211ENST00000522556 TDGQ13569 410 aa19.08■□□□□ 0.64
CLK4-211ENST00000522556 NFE2Q16621 373 aaPredicted RBP19.08■□□□□ 0.64
CLK4-211ENST00000522556 SPATA2LQ8IUW3 424 aaPredicted RBP19.08■□□□□ 0.64
CLK4-211ENST00000522556 GPIHBP1Q8IV16 184 aa19.08■□□□□ 0.64
CLK4-211ENST00000522556 SLC44A3Q8N4M1 653 aa19.08■□□□□ 0.64
CLK4-211ENST00000522556 FAM200AQ8TCP9 573 aa19.08■□□□□ 0.64
CLK4-211ENST00000522556 C2orf15Q8WU43 125 aaKnown RBP19.08■□□□□ 0.64
CLK4-211ENST00000522556 TMEM8AQ9HCN3 771 aa19.08■□□□□ 0.64
CLK4-211ENST00000522556 HSFX1Q9UBD0 423 aa19.08■□□□□ 0.64
CLK4-211ENST00000522556 KMT2EQ8IZD2 1858 aa19.07■□□□□ 0.64
CLK4-211ENST00000522556 CLDN5O00501 218 aa19.07■□□□□ 0.64
CLK4-211ENST00000522556 SLC16A3O15427 465 aaKnown RBP19.07■□□□□ 0.64
CLK4-211ENST00000522556 HMGA1P17096 107 aaKnown RBP19.07■□□□□ 0.64
CLK4-211ENST00000522556 BDNFP23560 247 aa19.07■□□□□ 0.64
CLK4-211ENST00000522556 TUFMP49411 452 aaKnown RBP19.07■□□□□ 0.64
CLK4-211ENST00000522556 MXI1P50539 228 aa19.07■□□□□ 0.64
CLK4-211ENST00000522556 SIGLEC14Q08ET2 396 aa19.07■□□□□ 0.64
CLK4-211ENST00000522556 PAK1Q13153 545 aa19.07■□□□□ 0.64
CLK4-211ENST00000522556 STIM1Q13586 685 aa19.07■□□□□ 0.64
CLK4-211ENST00000522556 SGSM1Q2NKQ1 1148 aa19.07■□□□□ 0.64
CLK4-211ENST00000522556 FAM78AQ5JUQ0 283 aa19.07■□□□□ 0.64
CLK4-211ENST00000522556 IER5LQ5T953 404 aa19.07■□□□□ 0.64
CLK4-211ENST00000522556 CYP4A22Q5TCH4 519 aa19.07■□□□□ 0.64
CLK4-211ENST00000522556 TCERG1LQ5VWI1 586 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms