RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NDUFAF2Q8N183 169 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 TRIM62Q9BVG3 475 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 SEMA4AQ9H3S1 761 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 GPRC5CQ9NQ84 441 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 KLHL2O95198 593 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 BRD2P25440 801 aaKnown RBP14.43□□□□□ -0.1
SYNPO-205ENST00000522122 STIP1P31948 543 aaKnown RBP14.43□□□□□ -0.1
SYNPO-205ENST00000522122 ERMARDQ5T6L9 678 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 ATF7IP2Q5U623 682 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 IER5Q5VY09 327 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 RASGEF1CQ8N431 466 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 CATSPER1Q8NEC5 780 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 DNAJC9Q8WXX5 260 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 HES6Q96HZ4 224 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 KCNK16Q96T55 309 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 TMEM39BQ9GZU3 492 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 SP110Q9HB58 689 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 RXFP1Q9HBX9 757 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 GRID1Q9ULK0 1009 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 WTIPA6NIX2 430 aaPredicted RBP14.43□□□□□ -0.1
SYNPO-205ENST00000522122 F8W8V4 182 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 UBOX5O94941 541 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 ARP10275 920 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 SULT1E1P49888 294 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 ARHGDIAP52565 204 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 UGP2Q16851 508 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 FAM71DQ8N9W8 422 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 E2F7Q96AV8 911 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 MAGEB2O15479 319 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 ANP32DO95626 131 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 NUDT17P0C025 328 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 ELF3P78545 371 aaPredicted RBP14.43□□□□□ -0.1
SYNPO-205ENST00000522122 BTBD8Q5XKL5 378 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 ACER1Q8TDN7 264 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 ULK4Q96C45 1275 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 GPRASP2Q96D09 838 aa14.43□□□□□ -0.1
SYNPO-205ENST00000522122 ICAM1P05362 532 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 GPD1P21695 349 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 DRD4P21917 467 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 INPP1P49441 399 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 LNX1Q8TBB1 728 aaPredicted RBP14.42□□□□□ -0.1
SYNPO-205ENST00000522122 NSL1Q96IY1 281 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 PLEKHA5Q9HAU0 1116 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 NOL4O94818 638 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 SPRP35270 261 aaPredicted RBP14.42□□□□□ -0.1
SYNPO-205ENST00000522122 BOLA3Q53S33 107 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 IRF2BP2Q7Z5L9 587 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 DACT3Q96B18 629 aaPredicted RBP14.42□□□□□ -0.1
SYNPO-205ENST00000522122 POLLQ9UGP5 575 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 CYP3A7-CYP3A51PA0A087WV96 503 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 CYP3A7P24462 503 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 CNGA3Q16281 694 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 LRRC36Q1X8D7 754 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 TTC39BQ5VTQ0 682 aaPredicted RBP14.42□□□□□ -0.1
SYNPO-205ENST00000522122 MICALL2Q8IY33 904 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 ATG4CQ96DT6 458 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 ASTN1O14525 1302 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 GRIN2DO15399 1336 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 ZC3H11AO75152 810 aaKnown RBP eCLIP14.42□□□□□ -0.1
SYNPO-205ENST00000522122 CTCFP49711 727 aaPredicted RBP14.42□□□□□ -0.1
SYNPO-205ENST00000522122 C2CD6Q53TS8 623 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 GMCL1Q96IK5 515 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 SARS2Q9NP81 518 aaKnown RBP14.42□□□□□ -0.1
SYNPO-205ENST00000522122 ABCF3Q9NUQ8 709 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 PRMT7Q9NVM4 692 aaPredicted RBP14.42□□□□□ -0.1
SYNPO-205ENST00000522122 PPME1Q9Y570 386 aa14.42□□□□□ -0.1
SYNPO-205ENST00000522122 UBA6A0AVT1 1052 aaPredicted RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 TRIM49D1C9J1S8 452 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 DFFAO00273 331 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 TLR2O60603 784 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 SHMT1P34896 483 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 CYP4A22Q5TCH4 519 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 LRRC8EQ6NSJ5 796 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 C4orf22Q6V702 233 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 LRRC6Q86X45 466 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 APPL2Q8NEU8 664 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 KRT35Q92764 455 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 SPON2Q9BUD6 331 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 PHTF1Q9UMS5 762 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 PIN4Q9Y237 131 aaKnown RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 NEMP1O14524 444 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 ZBTB24O43167 697 aaPredicted RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 PDGFRBP09619 1106 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 RRM1P23921 792 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 USP10Q14694 798 aaKnown RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 FASTKD5Q7L8L6 764 aaKnown RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 CMTM5Q96DZ9 223 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 EML4Q9HC35 981 aaKnown RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 FAM49BQ9NUQ9 324 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 SALL4Q9UJQ4 1053 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 ZNF142P52746 1687 aaPredicted RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 FRMPD4Q14CM0 1322 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 LAMA4Q16363 1823 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 IL10P22301 178 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 NPTX2P47972 431 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 IFI35P80217 286 aaPredicted RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 ZBTB17Q13105 803 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 ECM1Q16610 540 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 C15orf52Q6ZUT6 534 aaKnown RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 ARID3BQ8IVW6 561 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms