RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 THG1LQ9NWX6 298 aaKnown RBP16.32■□□□□ 0.2
CSMD1-207ENST00000520451 DDX43Q9NXZ2 648 aaKnown RBP16.32■□□□□ 0.2
CSMD1-207ENST00000520451 TMEM191BP0C7N4 346 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 HMGA1P17096 107 aaKnown RBP16.31■□□□□ 0.2
CSMD1-207ENST00000520451 ACAT1P24752 427 aaKnown RBP16.31■□□□□ 0.2
CSMD1-207ENST00000520451 AVPR1AP37288 418 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 NASPP49321 788 aaPredicted RBP16.31■□□□□ 0.2
CSMD1-207ENST00000520451 NLRP12P59046 1061 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 RBP5P82980 135 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 MYL7Q01449 175 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 PUM1Q14671 1186 aaKnown RBP eCLIP16.31■□□□□ 0.2
CSMD1-207ENST00000520451 PON2Q15165 354 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 WDR44Q5JSH3 913 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 DGKKQ5KSL6 1271 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 SCARA3Q6AZY7 606 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 Q6ZS52 159 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 STXBP4Q6ZWJ1 553 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 TMEM150AQ86TG1 271 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 CMTM8Q8IZV2 173 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 TMEM86AQ8N2M4 240 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 GPD1LQ8N335 351 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 CELF5Q8N6W0 485 aaKnown RBP16.31■□□□□ 0.2
CSMD1-207ENST00000520451 MAB21L3Q8N8X9 362 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 STKLD1Q8NE28 680 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 CXorf38Q8TB03 319 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 LEO1Q8WVC0 666 aaPredicted RBP16.31■□□□□ 0.2
CSMD1-207ENST00000520451 ACBD6Q9BR61 282 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 ZMYM5Q9UJ78 669 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 GMEB2Q9UKD1 530 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 RAB23Q9ULC3 237 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 MAGED2Q9UNF1 606 aaPredicted RBP16.31■□□□□ 0.2
CSMD1-207ENST00000520451 SNX9Q9Y5X1 595 aa16.31■□□□□ 0.2
CSMD1-207ENST00000520451 K7ELQ4 463 aaPredicted RBP16.3■□□□□ 0.2
CSMD1-207ENST00000520451 F11P03951 625 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 CSH1P0DML2 217 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 CSH2P0DML3 217 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 DDX6P26196 483 aaKnown RBP eCLIP16.3■□□□□ 0.2
CSMD1-207ENST00000520451 LPAL2Q16609 132 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 ITPRIPL2Q3MIP1 535 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 INTS6LQ5JSJ4 861 aaKnown RBP16.3■□□□□ 0.2
CSMD1-207ENST00000520451 SDHAF4Q5VUM1 108 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 LMBRD2Q68DH5 695 aaPredicted RBP16.3■□□□□ 0.2
CSMD1-207ENST00000520451 ADGRF2Q8IZF7 708 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 GPR161Q8N6U8 529 aaKnown RBP16.3■□□□□ 0.2
CSMD1-207ENST00000520451 LINC00301Q8NCQ3 95 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 GLIS3Q8NEA6 775 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 ANKRD36BP1Q96IX9 119 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 TNMDQ9H2S6 317 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 ABCB6Q9NP58 842 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 GDAP2Q9NXN4 497 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 SIX4Q9UIU6 781 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 CCL26Q9Y258 94 aa16.3■□□□□ 0.2
CSMD1-207ENST00000520451 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
CSMD1-207ENST00000520451 SPTLC2O15270 562 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 CYP2F1P24903 491 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 RPL10AP62906 217 aaKnown RBP16.29■□□□□ 0.2
CSMD1-207ENST00000520451 DDR2Q16832 855 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 CCDC142Q17RM4 750 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 RSPO4Q2I0M5 234 aaPredicted RBP16.29■□□□□ 0.2
CSMD1-207ENST00000520451 TXNDC8Q6A555 127 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 PRR23BQ6ZRT6 265 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 OSTM1Q86WC4 334 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 TOP6BLQ8N6T0 577 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 MRPS31Q92665 395 aaKnown RBP16.29■□□□□ 0.2
CSMD1-207ENST00000520451 USP13Q92995 863 aaPredicted RBP16.29■□□□□ 0.2
CSMD1-207ENST00000520451 HPS3Q969F9 1004 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 LRRC27Q9C0I9 530 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 GKN1Q9NS71 199 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 GTF3C4Q9UKN8 822 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 USP18Q9UMW8 372 aa16.29■□□□□ 0.2
CSMD1-207ENST00000520451 R3HCC1Q9Y3T6 440 aaKnown RBP16.29■□□□□ 0.2
CSMD1-207ENST00000520451 PTPRJQ12913 1337 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 CHURC1-FNTBB4DL54 471 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 HCRTO43612 131 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 TNNC2P02585 160 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 PCSK1P29120 753 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 LHX1P48742 406 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 FNTBP49356 437 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 ASIC1P78348 528 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 DMWDQ09019 674 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 MYO1EQ12965 1108 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 E2F4Q16254 413 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 CBWD2Q8IUF1 395 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 SPATA2LQ8IUW3 424 aaPredicted RBP16.28■□□□□ 0.2
CSMD1-207ENST00000520451 OR5B17Q8NGF7 314 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 SPATA18Q8TC71 538 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 ZNF396Q96N95 335 aaPredicted RBP16.28■□□□□ 0.2
CSMD1-207ENST00000520451 PKMYT1Q99640 499 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 KIF9Q9HAQ2 790 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 TDP1Q9NUW8 608 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 INTS13Q9NVM9 706 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 DLL3Q9NYJ7 618 aa16.28■□□□□ 0.2
CSMD1-207ENST00000520451 TFIP11Q9UBB9 837 aaKnown RBP16.28■□□□□ 0.2
CSMD1-207ENST00000520451 UXTQ9UBK9 157 aaPredicted RBP16.28■□□□□ 0.2
CSMD1-207ENST00000520451 MED19A0JLT2 244 aaPredicted RBP16.27■□□□□ 0.2
CSMD1-207ENST00000520451 ZNF233A6NK53 670 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 K7ESF4 209 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 GABRDO14764 452 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 NOL4O94818 638 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 PAPSS2O95340 614 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms