RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 TJP2Q9UDY2 1190 aa18.08■□□□□ 0.48
TSNARE1-205ENST00000520166 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.08■□□□□ 0.48
TSNARE1-205ENST00000520166 KIAA1671Q9BY89 1806 aa18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 VDRP11473 427 aa18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 UNGP13051 313 aaPredicted RBP18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 ADORA2BP29275 332 aa18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 MAGEA1P43355 309 aa18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 CLEC16AQ2KHT3 1053 aa18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 VARS2Q5ST30 1063 aaKnown RBP18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 PRSS55Q6UWB4 352 aaPredicted RBP18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 TMEM86AQ8N2M4 240 aa18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 FIBCD1Q8N539 461 aa18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 RNPC3Q96LT9 517 aaKnown RBP18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 ZNF558Q96NG5 402 aa18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 INSL6Q9Y581 213 aa18.07■□□□□ 0.48
TSNARE1-205ENST00000520166 NRDCO43847 1150 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 FTLP02792 175 aaPredicted RBP18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 CYP1A1P04798 512 aaPredicted RBP18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 FGFR3P22607 806 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 PBX2P40425 430 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 ARHGAP25P42331 645 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 GOLGA7BQ2TAP0 167 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 SGO2Q562F6 1265 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 TTC30AQ86WT1 665 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 C1orf131Q8NDD1 294 aaKnown RBP18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 SLC2A14Q8TDB8 520 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 AUTS2Q8WXX7 1259 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 PPP1R13BQ96KQ4 1090 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 SLC9A7Q96T83 725 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 SYT15Q9BQS2 421 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 B3GNT5Q9BYG0 378 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 IRX2Q9BZI1 471 aaPredicted RBP18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 PDCL3Q9H2J4 239 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 LZTFL1Q9NQ48 299 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 TMEM30AQ9NV96 361 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 SALL4Q9UJQ4 1053 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 TSPAN16Q9UKR8 245 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 PIK3R2O00459 728 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 C2CD2LO14523 706 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 ADAM12O43184 909 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 ATMINO43313 823 aaPredicted RBP18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 BEST1O76090 585 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 CSPG5O95196 566 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 RPL17P18621 184 aaKnown RBP18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 TYMPP19971 482 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 LHX1P48742 406 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 CACNA2D1P54289 1103 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 YWHAHQ04917 246 aaPredicted RBP18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 MRPL58Q14197 206 aaKnown RBP18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 CNGA2Q16280 664 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 METTL23Q86XA0 190 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 FUKQ8N0W3 1084 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 PHOSPHO2Q8TCD6 241 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 ARHGEF26Q96DR7 871 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 PKMYT1Q99640 499 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 GDF15Q99988 308 aa18.06■□□□□ 0.48
TSNARE1-205ENST00000520166 SF3B1O75533 1304 aaKnown RBP eCLIP18.05■□□□□ 0.483e-8■■■■■ 249.9
TSNARE1-205ENST00000520166 M0QYV0 167 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 CAPN15O75808 1086 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 GABBR2O75899 941 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 OAZ2O95190 189 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 ABCB4P21439 1286 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 GALCP54803 685 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 NOMO3P69849 1222 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 SPA17Q15506 151 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 ZNF677Q86XU0 584 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 FMNL3Q8IVF7 1028 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 RNF168Q8IYW5 571 aaPredicted RBP18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 SP7Q8TDD2 431 aaPredicted RBP18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 C17orf80Q9BSJ5 609 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 UBE2OQ9C0C9 1292 aaKnown RBP18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 MTUS1Q9ULD2 1270 aa18.05■□□□□ 0.48
TSNARE1-205ENST00000520166 TRAPPC3O43617 180 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 CCDC175P0C221 793 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 FAM163BP0C2L3 166 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 ACAD10Q6JQN1 1059 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 LCLAT1Q6UWP7 414 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 VPS36Q86VN1 386 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 TTC39CQ8N584 583 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 KLHL23Q8NBE8 558 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 CLP1Q92989 425 aaKnown RBP18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 PCED1BQ96HM7 432 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 ACBD6Q9BR61 282 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 THAP2Q9H0W7 228 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 ISCUQ9H1K1 167 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 SPG21Q9NZD8 308 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 PCDHGC3Q9UN70 934 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 YBX2Q9Y2T7 364 aaKnown RBP18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 PAXBP1Q9Y5B6 917 aa18.04■□□□□ 0.48
TSNARE1-205ENST00000520166 LINC01553A4QN01 128 aa18.03■□□□□ 0.48
TSNARE1-205ENST00000520166 ESPNB1AK53 854 aa18.03■□□□□ 0.48
TSNARE1-205ENST00000520166 LAG3P18627 525 aa18.03■□□□□ 0.48
TSNARE1-205ENST00000520166 GPD2P43304 727 aa18.03■□□□□ 0.48
TSNARE1-205ENST00000520166 ARPP19P56211 112 aa18.03■□□□□ 0.48
TSNARE1-205ENST00000520166 PKDCCQ504Y2 493 aa18.03■□□□□ 0.48
TSNARE1-205ENST00000520166 INTS6LQ5JSJ4 861 aaKnown RBP18.03■□□□□ 0.48
TSNARE1-205ENST00000520166 FAM171BQ6P995 826 aa18.03■□□□□ 0.48
TSNARE1-205ENST00000520166 KIAA1328Q86T90 577 aa18.03■□□□□ 0.48
TSNARE1-205ENST00000520166 SECISBP2LQ93073 1101 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms