RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 PIRO00625 290 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 PIGRP01833 764 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 SCP2P22307 547 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 NCKAP1LP55160 1127 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 NBR1Q14596 966 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 USP39Q53GS9 565 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 HYIQ5T013 277 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 NAIF1Q69YI7 327 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 CPA6Q8N4T0 437 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 SYT2Q8N9I0 419 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 FBXO18Q8NFZ0 1043 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 CCDC26Q8TAB7 109 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 MRPS31Q92665 395 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 BICD1Q96G01 975 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 SCNM1Q9BWG6 230 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 CCSER1Q9C0I3 900 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 ECT2Q9H8V3 914 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 DERAQ9Y315 318 aa13.35□□□□□ -0.27
TRAPPC9-204ENST00000518723 NBEAQ8NFP9 2946 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 FREM2Q5SZK8 3169 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 LAD1O00515 517 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 TOP3BO95985 862 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 NMT1P30419 496 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 GBP1P32455 592 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 PRPHP41219 470 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 LIG4P49917 911 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 DGKEP52429 567 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 RAD51AP2Q09MP3 1159 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 MTF1Q14872 753 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 IL17AQ16552 155 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 TXNDC8Q6A555 127 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 JADE1Q6IE81 842 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 LRRTM3Q86VH5 581 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 RASSF3Q86WH2 238 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 METTL23Q86XA0 190 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 THEM5Q8N1Q8 247 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 TSTD1Q8NFU3 115 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 CD101Q93033 1021 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 LARSQ9P2J5 1176 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 EVLQ9UI08 416 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 TSC2P49815 1807 aa13.34□□□□□ -0.27
TRAPPC9-204ENST00000518723 A0A0B4J269 797 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 CYB561D2O14569 222 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 HNRNPDLO14979 420 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 NFICP08651 508 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 CSH1P0DML2 217 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 CSH2P0DML3 217 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 U2AF2P26368 475 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 TOB1P50616 345 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 SLC12A3P55017 1021 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 FAM160A1Q05DH4 1040 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 GNL2Q13823 731 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 TMEM132DQ14C87 1099 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 ZNF77Q15935 545 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 LRSAM1Q6UWE0 723 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 CYP2U1Q7Z449 544 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 DCP1BQ8IZD4 617 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 OSCP1Q8WVF1 389 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 ZCCHC14Q8WYQ9 949 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 ATP2A3Q93084 1043 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 CNOT6LQ96LI5 555 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 LLPHQ9BRT6 129 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 ASB7Q9H672 318 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 TMEM206Q9H813 350 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 ABI2Q9NYB9 513 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 CPSF3Q9UKF6 684 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 C2CD2Q9Y426 696 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 NEUROG3Q9Y4Z2 214 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 PCDHB6Q9Y5E3 794 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 PCDHB5Q9Y5E4 795 aa13.33□□□□□ -0.28
TRAPPC9-204ENST00000518723 ATG2BQ96BY7 2078 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 PATE3B3GLJ2 98 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 TADA3O75528 432 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 TAF6P49848 677 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 CDR1P51861 262 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 NEK4P51957 841 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 IRX4P78413 519 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 USP4Q13107 963 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 EML3Q32P44 896 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 WSCD1Q658N2 575 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 LEO1Q8WVC0 666 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 TRMT2BQ96GJ1 504 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 MYRFLQ96LU7 910 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 PYM1Q9BRP8 204 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 DUS2Q9NX74 493 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 UXTQ9UBK9 157 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 LAMA5O15230 3695 aa13.32□□□□□ -0.28
TRAPPC9-204ENST00000518723 CACNA1EQ15878 2313 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 NOL4O94818 638 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 TCF3P15923 654 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 BCKDHBP21953 392 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 IFNAR2P48551 515 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 RING1Q06587 406 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 LMAN2Q12907 356 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 NR1H3Q13133 447 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 NFE2Q16621 373 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 ARSHQ5FYA8 562 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 DEFB124Q8NES8 71 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms