RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 GPD2P43304 727 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 KLF1Q13351 362 aaPredicted RBP28.04■■■□□ 2.08
COL13A1-210ENST00000517713 ZNF268Q14587 947 aaPredicted RBP28.04■■■□□ 2.08
COL13A1-210ENST00000517713 DPH6Q7L8W6 267 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 TMC3Q7Z5M5 1100 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 XYLT1Q86Y38 959 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 RCOR2Q8IZ40 523 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 CHST7Q9NS84 486 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 CYBAP13498 195 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 RFC1P35251 1148 aaPredicted RBP28.04■■■□□ 2.08
COL13A1-210ENST00000517713 PSMC4P43686 418 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 RPL21P46778 160 aaKnown RBP28.04■■■□□ 2.08
COL13A1-210ENST00000517713 GJA9P57773 515 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 SNX1Q13596 522 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 ATP13A4Q4VNC1 1196 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 GNASQ5JWF2 1037 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 UBXN11Q5T124 520 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 MFSD14CQ5VZR4 134 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 RNF25Q96BH1 459 aaPredicted RBP28.04■■■□□ 2.08
COL13A1-210ENST00000517713 DCLK3Q9C098 648 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 ARHGAP39Q9C0H5 1083 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 GRHL1Q9NZI5 618 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 UBQLN1Q9UMX0 589 aaKnown RBP28.04■■■□□ 2.08
COL13A1-210ENST00000517713 PLAAQ9Y263 795 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 GABRB2P47870 512 aa28.03■■■□□ 2.08
COL13A1-210ENST00000517713 PDCLQ13371 301 aa28.03■■■□□ 2.08
COL13A1-210ENST00000517713 MTMR3Q13615 1198 aa28.03■■■□□ 2.08
COL13A1-210ENST00000517713 UAP1Q16222 522 aaPredicted RBP28.03■■■□□ 2.08
COL13A1-210ENST00000517713 UBA3Q8TBC4 463 aa28.03■■■□□ 2.08
COL13A1-210ENST00000517713 RBM41Q96IZ5 413 aaKnown RBP28.03■■■□□ 2.08
COL13A1-210ENST00000517713 MRPL45Q9BRJ2 306 aaKnown RBP28.03■■■□□ 2.08
COL13A1-210ENST00000517713 MTG1Q9BT17 334 aaPredicted RBP28.03■■■□□ 2.08
COL13A1-210ENST00000517713 HOMER3Q9NSC5 361 aa28.03■■■□□ 2.08
COL13A1-210ENST00000517713 PARP2Q9UGN5 583 aa28.03■■■□□ 2.08
COL13A1-210ENST00000517713 PLTPP55058 493 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 DHX9Q08211 1270 aaKnown RBP28.02■■■□□ 2.08
COL13A1-210ENST00000517713 ZFYVE27Q5T4F4 411 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 C9orf57Q5W0N0 161 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 TAF2Q6P1X5 1199 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 LCLAT1Q6UWP7 414 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 ZDHHC24Q6UX98 284 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 ZNF771Q7L3S4 317 aaPredicted RBP28.02■■■□□ 2.08
COL13A1-210ENST00000517713 JOSD2Q8TAC2 188 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 ATG4AQ8WYN0 398 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 TRIB2Q92519 343 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 RNF19AQ9NV58 838 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 KLHL11Q9NVR0 708 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 PSD3Q9NYI0 1048 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 ZKSCAN7Q9P0L1 754 aaPredicted RBP28.02■■■□□ 2.08
COL13A1-210ENST00000517713 GABRQQ9UN88 632 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 GOLGA6CA6NDK9 693 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 GOLGA6DP0CG33 693 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 PSMA2P25787 234 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 NFX1Q12986 1120 aaKnown RBP28.02■■■□□ 2.08
COL13A1-210ENST00000517713 PPP1R7Q15435 360 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 GOLGA6AQ9NYA3 693 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 KLK14Q9P0G3 267 aa28.02■■■□□ 2.08
COL13A1-210ENST00000517713 R3HDM2Q9Y2K5 976 aaKnown RBP28.02■■■□□ 2.08
COL13A1-210ENST00000517713 SMIM28A0A1B0GU29 152 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 KRT14P02533 472 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 KRT1P04264 644 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 ATF7P17544 494 aaPredicted RBP28.01■■■□□ 2.07
COL13A1-210ENST00000517713 CYP3A5P20815 502 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 LRIG3Q6UXM1 1119 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 ANKS1BQ7Z6G8 1248 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 FNIP1Q8TF40 1166 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 UBLCP1Q8WVY7 318 aaPredicted RBP28.01■■■□□ 2.07
COL13A1-210ENST00000517713 SLITRK1Q96PX8 696 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 RNF39Q9H2S5 420 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 METTL5Q9NRN9 209 aaKnown RBP28.01■■■□□ 2.07
COL13A1-210ENST00000517713 TSPAN16Q9UKR8 245 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 SCN1AP35498 2009 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 PI4K2BG5E9Z4 385 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 CD4P01730 458 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 STILQ15468 1287 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 FBXO25Q8TCJ0 367 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 GRK7Q8WTQ7 553 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 ARL8AQ96BM9 186 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 MCRS1Q96EZ8 462 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 TSPAN18Q96SJ8 248 aa28.01■■■□□ 2.07
COL13A1-210ENST00000517713 DDX56Q9NY93 547 aaKnown RBP28.01■■■□□ 2.07
COL13A1-210ENST00000517713 PPFIA2O75334 1257 aa28■■■□□ 2.07
COL13A1-210ENST00000517713 KCNE1P15382 129 aa28■■■□□ 2.07
COL13A1-210ENST00000517713 KRT17Q04695 432 aa28■■■□□ 2.07
COL13A1-210ENST00000517713 XKR4Q5GH76 650 aa28■■■□□ 2.07
COL13A1-210ENST00000517713 C12orf29Q8N999 325 aa28■■■□□ 2.07
COL13A1-210ENST00000517713 FEZ2Q9UHY8 353 aaPredicted RBP28■■■□□ 2.07
COL13A1-210ENST00000517713 PDCD11Q14690 1871 aaKnown RBP28■■■□□ 2.07
COL13A1-210ENST00000517713 CCNG2Q16589 344 aa27.99■■■□□ 2.07
COL13A1-210ENST00000517713 ODF2Q5BJF6 829 aa27.99■■■□□ 2.07
COL13A1-210ENST00000517713 TTMPQ5BVD1 217 aa27.99■■■□□ 2.07
COL13A1-210ENST00000517713 CXCL17Q6UXB2 119 aa27.99■■■□□ 2.07
COL13A1-210ENST00000517713 SYDE1Q6ZW31 735 aaPredicted RBP27.99■■■□□ 2.07
COL13A1-210ENST00000517713 TXLNGYQ9BZA5 131 aa27.99■■■□□ 2.07
COL13A1-210ENST00000517713 IPPQ9Y573 584 aa27.99■■■□□ 2.07
COL13A1-210ENST00000517713 PIRO00625 290 aa27.99■■■□□ 2.07
COL13A1-210ENST00000517713 XPOTO43592 962 aaKnown RBP27.99■■■□□ 2.07
COL13A1-210ENST00000517713 PGK1P00558 417 aa27.99■■■□□ 2.07
COL13A1-210ENST00000517713 FLT3LGP49771 235 aa27.99■■■□□ 2.07
COL13A1-210ENST00000517713 COPS2P61201 443 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms