RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ABL1P00519 1130 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 A1BGP04217 495 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 PRSS2P07478 247 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 RHOP08100 348 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 MMEP08473 750 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 HOXC4P09017 264 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 IL2RBP14784 551 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 JUPP14923 745 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 PPP3CBP16298 524 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 NXPH1P58417 271 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 POU5F1Q01860 360 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 APBA1Q02410 837 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 LMNB2Q03252 620 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 DUSP2Q05923 314 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 ZNF211Q13398 564 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 PPIGQ13427 754 aaKnown RBP eCLIP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 ELOAQ14241 798 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 LRRFIP1Q32MZ4 808 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 DALRD3Q5D0E6 543 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 TMEM164Q5U3C3 297 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 WSCD1Q658N2 575 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 SERPINA13PQ6UXR4 307 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 C9orf139Q6ZV77 190 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 USP53Q70EK8 1073 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 MAVSQ7Z434 540 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 EXOC3L1Q86VI1 746 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 NLGN4XQ8N0W4 816 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 FAM76AQ8TAV0 307 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 GRAPLQ8TC17 118 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 ALKBH8Q96BT7 664 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 DAZAP1Q96EP5 407 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 ABHD8Q96I13 439 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 CITED4Q96RK1 184 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 CABLES2Q9BTV7 478 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 ALG8Q9BVK2 526 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 KCNMB3Q9NPA1 279 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 CYP26B1Q9NR63 512 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 ARHGEF3Q9NR81 526 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 RBM12Q9NTZ6 932 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 DNAJB11Q9UBS4 358 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 MAN1B1Q9UKM7 699 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 RARRES3Q9UL19 164 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 COG5Q9UP83 839 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 ZNF175Q9Y473 711 aa-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 TDRD6O60522 2096 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.16-201ENST00000517238 FAM172BPA6NC97 362 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 MEIS3P2A8K0S8 358 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 CXorf49A8MYA2 514 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 F6X3S4 739 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 H0YGN5 161 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 H7C1Q1 480 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 PPP6R2O75170 966 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 PF4P02776 101 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 EPHX1P07099 455 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 GATA3P23771 443 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 GRK2P25098 689 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 SHC1P29353 583 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 GRK3P35626 688 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 NKX2-1P43699 371 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 SEC61A1P61619 476 aaKnown RBP-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 B4GALNT1Q00973 533 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 PRB3Q04118 309 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 FMR1Q06787 632 aaKnown RBP eCLIP-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 PPP3CAQ08209 521 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 MAP4K2Q12851 820 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 SLC9C1Q4G0N8 1177 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 SNAP47Q5SQN1 464 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 ACBD5Q5T8D3 534 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 ANKRD16Q6P6B7 361 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 GDPD4Q6W3E5 623 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 EP400NLQ6ZTU2 488 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 CRACR2BQ8N4Y2 399 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 TRIM58Q8NG06 486 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 SPATA20Q8TB22 786 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 MAP4K1Q92918 833 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 DMRTB1Q96MA1 342 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 GPR83Q9NYM4 423 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 EHD3Q9NZN3 535 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 ATP23Q9Y6H3 246 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 CKAP5Q14008 2032 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 ZMYM3Q14202 1370 aa-0.61□□□□□ -2.51
SNORA40.16-201ENST00000517238 TTBK1Q5TCY1 1321 aaPredicted RBP-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 RPS10-NUDT3A0A1W2PQS6 291 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 H0Y9J4 135 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 NTSR2O95665 410 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 HGFP14210 728 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 RXRAP19793 462 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 GCSHP23434 173 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 CYP4F3Q08477 520 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 ENPP2Q13822 863 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 BMPR2Q13873 1038 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 INTS3Q68E01 1043 aaKnown RBP-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 SWSAP1Q6NVH7 229 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 FAAP20Q6NZ36 180 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 POMZP3Q6PJE2 187 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 GK5Q6ZS86 529 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 TRAPPC11Q7Z392 1133 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 SH3RF2Q8TEC5 729 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 LINC00479Q96M42 142 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms