RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ELOVL4Q9GZR5 314 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 ZCWPW1Q9H0M4 648 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 CRTAC1Q9NQ79 661 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 ABI2Q9NYB9 513 aaPredicted RBP10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 FBXW11Q9UKB1 542 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 MTMR11A4FU01 709 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 EPHB6O15197 1021 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 P4HA2O15460 535 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 TACC1O75410 805 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 SERPINC1P01008 464 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 C8AP07357 584 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 TPM2P07951 284 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 CCDC130P13994 396 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 KCNA5P22460 613 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 GNL1P36915 607 aaPredicted RBP10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 LTBRP36941 435 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 LHX1P48742 406 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 GPR15P49685 360 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 TPM4P67936 248 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 TSPY1Q01534 308 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 UBXN1Q04323 297 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 ADCY1Q08828 1119 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 CETN1Q12798 172 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 KCNC3Q14003 757 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 SYCP1Q15431 976 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 ARHGAP44Q17R89 818 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 RARS2Q5T160 578 aaKnown RBP10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 ACOT1Q86TX2 421 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 ATAD1Q8NBU5 361 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 KREMEN2Q8NCW0 462 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 SLC7A14Q8TBB6 771 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 WHAMMQ8TF30 809 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 PABPC5Q96DU9 382 aaKnown RBP10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 CCDC97Q96F63 343 aaPredicted RBP10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 PCMTD1Q96MG8 357 aaPredicted RBP10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 NAP1L5Q96NT1 182 aaPredicted RBP10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 PKMYT1Q99640 499 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 MFRPQ9BY79 579 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 RBSNQ9H1K0 784 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 UBE2ZQ9H832 354 aaPredicted RBP10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 CYP4F11Q9HBI6 524 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 CISHQ9NSE2 258 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 FAM49BQ9NUQ9 324 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 CLEC1BQ9P126 229 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 GTF3C4Q9UKN8 822 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 SLC27A5Q9Y2P5 690 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 FHOD1Q9Y613 1164 aa10.46□□□□□ -0.73
TOPBP1-209ENST00000513818 UNC80Q8N2C7 3258 aa10.46□□□□□ -0.74
TOPBP1-209ENST00000513818 C2orf16Q68DN1 1984 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 PTPRDP23468 1912 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 CLDN5O00501 218 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 PRRG1O14668 218 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 PMM2O15305 246 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 CCL16O15467 120 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 CILPO75339 1184 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 PCSK1P29120 753 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 CACNA2D1P54289 1103 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 FANCCQ00597 558 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 CYP27A1Q02318 531 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 TFF2Q03403 129 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 INCA1Q0VD86 236 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 DUSP4Q13115 394 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 GPR17Q13304 367 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 ADAM15Q13444 863 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 CTC1Q2NKJ3 1217 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 FKBP15Q5T1M5 1219 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 LIN9Q5TKA1 542 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 SDHAF4Q5VUM1 108 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 IQCEQ6IPM2 695 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 DPY19L2P1Q6NXN4 242 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 ANKRD54Q6NXT1 300 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 LILRA6Q6PI73 481 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 TMC5Q6UXY8 1006 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 PPFIBP1Q86W92 1011 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 GPR65Q8IYL9 337 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 UBR7Q8N806 425 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 C12orf29Q8N999 325 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 B3GALNT2Q8NCR0 500 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 CASP10Q92851 521 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 CDCA3Q99618 268 aaPredicted RBP10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 SEPT5Q99719 369 aaPredicted RBP10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 ZNF518BQ9C0D4 1074 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 CYP3A43Q9HB55 503 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 UBE2TQ9NPD8 197 aaPredicted RBP10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 FAM207AQ9NSI2 230 aaPredicted RBP10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 IFNKQ9P0W0 207 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 APEX2Q9UBZ4 518 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 CDH9Q9ULB4 789 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 SIK3Q9Y2K2 1263 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 YIPF1Q9Y548 306 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 PCDHB4Q9Y5E5 795 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 BRWD1Q9NSI6 2320 aa10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 MTCL1Q9Y4B5 1905 aaKnown RBP10.45□□□□□ -0.74
TOPBP1-209ENST00000513818 GTPBP10A4D1E9 387 aaKnown RBP10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 ABLIM3O94929 683 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 CAVIN2O95810 425 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 KRT5P13647 590 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 PTPN1P18031 435 aaKnown RBP10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 ACO1P21399 889 aaKnown RBP10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 ADORA2BP29275 332 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms