RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 SMNDC1O75940 238 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRIO-220ENST00000512979 C1RP00736 705 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 MCM4P33991 863 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 PRPHP41219 470 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 NPTX2P47972 431 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 ELAVL2Q12926 359 aaKnown RBP10.33□□□□□ -0.76
TRIO-220ENST00000512979 DMP1Q13316 513 aaPredicted RBP10.33□□□□□ -0.76
TRIO-220ENST00000512979 ZRSR1Q15695 479 aaKnown RBP10.33□□□□□ -0.76
TRIO-220ENST00000512979 NAB2Q15742 525 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 PSMD5Q16401 504 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 PCSK7Q16549 785 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 LILRA6Q6PI73 481 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 SYT9Q86SS6 491 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 LNX1Q8TBB1 728 aaPredicted RBP10.33□□□□□ -0.76
TRIO-220ENST00000512979 MYADMQ96S97 322 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 CLSTN3Q9BQT9 956 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 LRRC3Q9BY71 257 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 FAM86C1Q9NVL1 165 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 ZDHHC7Q9NXF8 308 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 IGSF9Q9P2J2 1179 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 FBXL21Q9UKT6 434 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 DUSP12Q9UNI6 340 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 TNFSF13BQ9Y275 285 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 DENND4AQ7Z401 1863 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 KMT2EQ8IZD2 1858 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 CACNA1HO95180 2353 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 PHLPP2Q6ZVD8 1323 aa10.33□□□□□ -0.76
TRIO-220ENST00000512979 C2orf16Q68DN1 1984 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 PLXNA3P51805 1871 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 NRG2O14511 850 aaPredicted RBP10.32□□□□□ -0.76
TRIO-220ENST00000512979 B3GAT3O94766 335 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 PAPLNO95428 1278 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 BMP6P22004 513 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 YARSP54577 528 aaKnown RBP10.32□□□□□ -0.76
TRIO-220ENST00000512979 PCDH1Q08174 1060 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 SEPT6Q14141 434 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 ZNF568Q3ZCX4 644 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 RILPL1Q5EBL4 403 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 LIN9Q5TKA1 542 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 RINT1Q6NUQ1 792 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.32□□□□□ -0.76
TRIO-220ENST00000512979 C1orf186Q6ZWK4 172 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 GET4Q7L5D6 327 aaPredicted RBP10.32□□□□□ -0.76
TRIO-220ENST00000512979 KCNK18Q7Z418 384 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 DAW1Q8N136 415 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 TMEM105Q8N8V8 129 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 FLCNQ8NFG4 579 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 ATOH1Q92858 354 aaPredicted RBP10.32□□□□□ -0.76
TRIO-220ENST00000512979 TMX3Q96JJ7 454 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 PPP1R10Q96QC0 940 aaKnown RBP10.32□□□□□ -0.76
TRIO-220ENST00000512979 ACO2Q99798 780 aaKnown RBP10.32□□□□□ -0.76
TRIO-220ENST00000512979 MMTAG2Q9BU76 263 aaKnown RBP10.32□□□□□ -0.76
TRIO-220ENST00000512979 CCDC94Q9BW85 323 aaPredicted RBP10.32□□□□□ -0.76
TRIO-220ENST00000512979 TARS2Q9BW92 718 aaKnown RBP10.32□□□□□ -0.76
TRIO-220ENST00000512979 MRPL4Q9BYD3 311 aaKnown RBP10.32□□□□□ -0.76
TRIO-220ENST00000512979 IRF2BPLQ9H1B7 796 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 CDT1Q9H211 546 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 KMT5AQ9NQR1 393 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 ARHGAP28Q9P2N2 729 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 EPS15L1Q9UBC2 864 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 FBXW11Q9UKB1 542 aa10.32□□□□□ -0.76
TRIO-220ENST00000512979 FAM221AA4D161 298 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 H0Y858 1186 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 H3BQV1 296 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 TMEM189-UBE2V1I3L0A0 370 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 ADAM12O43184 909 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 NARSO43776 548 aaKnown RBP10.31□□□□□ -0.76
TRIO-220ENST00000512979 B3GALT4O96024 378 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 C8AP07357 584 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 HARSP12081 509 aaKnown RBP10.31□□□□□ -0.76
TRIO-220ENST00000512979 NME2P22392 152 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 IGFBP6P24592 240 aaPredicted RBP10.31□□□□□ -0.76
TRIO-220ENST00000512979 GJB2P29033 226 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 CLCNKBP51801 687 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 OSTNP61366 133 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 ATP2C1P98194 919 aaPredicted RBP10.31□□□□□ -0.76
TRIO-220ENST00000512979 MAPK7Q13164 816 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 ZNF423Q2M1K9 1284 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 PPM1LQ5SGD2 360 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 FBXW10Q5XX13 1052 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 CWF19L1Q69YN2 538 aaKnown RBP10.31□□□□□ -0.76
TRIO-220ENST00000512979 PDXDC1Q6P996 788 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 DCLRE1AQ6PJP8 1040 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 ADAMTSL4Q6UY14 1074 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 RSAD2Q8WXG1 361 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 PLD4Q96BZ4 506 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 UROC1Q96N76 676 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 GOLGA2P5Q9HBQ8 144 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 PTPRHQ9HD43 1115 aa10.31□□□□□ -0.76
TRIO-220ENST00000512979 TOPORSQ9NS56 1045 aaPredicted RBP10.31□□□□□ -0.76
TRIO-220ENST00000512979 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRIO-220ENST00000512979 SMIM28A0A1B0GU29 152 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 VWA3AA6NCI4 1184 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 SLC16A4O15374 487 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 HNRNPA1P09651 372 aaKnown RBP eCLIP10.3□□□□□ -0.76
TRIO-220ENST00000512979 LAMP2P13473 410 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 CPB1P15086 417 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 GUCY2CP25092 1073 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 CLCN5P51795 746 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 MPP2Q14168 576 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms