RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TXLNAP40222 546 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 SOX9P48436 509 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 LHX1P48742 406 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 NLRP12P59046 1061 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 MYL7Q01449 175 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 BFSP1Q12934 665 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 PON2Q15165 354 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 ZC2HC1CQ53FD0 456 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-216ENST00000512683 RRAGBQ5VZM2 374 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 PRR23CQ6ZRP0 262 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 CEP68Q76N32 757 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-216ENST00000512683 TMEM130Q8N3G9 435 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 TTC9BQ8N6N2 239 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 TRMT2BQ96GJ1 504 aaKnown RBP13.53□□□□□ -0.24
VEGFA-216ENST00000512683 FUBP3Q96I24 572 aaKnown RBP eCLIP13.53□□□□□ -0.24
VEGFA-216ENST00000512683 CLIC6Q96NY7 704 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 LPIN3Q9BQK8 851 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 TMEM206Q9H813 350 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 MRPL44Q9H9J2 332 aaKnown RBP13.53□□□□□ -0.24
VEGFA-216ENST00000512683 OLFML3Q9NRN5 406 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 RBM12Q9NTZ6 932 aaKnown RBP13.53□□□□□ -0.24
VEGFA-216ENST00000512683 GDAP2Q9NXN4 497 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 ITGA11Q9UKX5 1188 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 PCDHGA5Q9Y5G8 931 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 SOAT2O75908 522 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 PRAMEF12O95522 483 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 ADRB1P08588 477 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 FAM163BP0C2L3 166 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 PCSK1P29120 753 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 RBP5P82980 135 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 CEBPZQ03701 1054 aaKnown RBP13.52□□□□□ -0.25
VEGFA-216ENST00000512683 CFAP221Q4G0U5 840 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 L1TD1Q5T7N2 865 aaKnown RBP13.52□□□□□ -0.25
VEGFA-216ENST00000512683 CCDC73Q6ZRK6 1079 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 TMEM150AQ86TG1 271 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 TOP6BLQ8N6T0 577 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 GIPC2Q8TF65 315 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 GAB3Q8WWW8 586 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 ZFYVE19Q96K21 471 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 USP28Q96RU2 1077 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 ABI2Q9NYB9 513 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-216ENST00000512683 SLC8A2Q9UPR5 921 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 EPG5Q9HCE0 2579 aa13.52□□□□□ -0.25
VEGFA-216ENST00000512683 SCN1AP35498 2009 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 DCDC2BA2VCK2 349 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 STX6O43752 255 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 EXTL3O43909 919 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 PRPF40AO75400 957 aaKnown RBP13.51□□□□□ -0.25
VEGFA-216ENST00000512683 NOL4O94818 638 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 ZNF806P0C7X5 589 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 TCF3P15923 654 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 PDE6CP51160 858 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 CYP4F8P98187 520 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 TNK2Q07912 1038 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 NR1H3Q13133 447 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 SLC39A14Q15043 492 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 SURF1Q15526 300 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 LPAL2Q16609 132 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 WDR44Q5JSH3 913 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 Q6ZS52 159 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 BRSK2Q8IWQ3 736 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 EFCAB13Q8IY85 973 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 PDCL2Q8N4E4 241 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 FAM160A2Q8N612 972 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-216ENST00000512683 MAB21L3Q8N8X9 362 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 FSIP1Q8NA03 581 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 USP13Q92995 863 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-216ENST00000512683 SNX21Q969T3 373 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 ZC3H10Q96K80 434 aaKnown RBP13.51□□□□□ -0.25
VEGFA-216ENST00000512683 LRRC27Q9C0I9 530 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 EHD2Q9NZN4 543 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 AGAP1Q9UPQ3 857 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 R3HCC1Q9Y3T6 440 aaKnown RBP13.51□□□□□ -0.25
VEGFA-216ENST00000512683 ACACBO00763 2458 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 TCHHQ07283 1943 aa13.51□□□□□ -0.25
VEGFA-216ENST00000512683 DMXL1Q9Y485 3027 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 A0A087X0B3 334 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-216ENST00000512683 GABRDO14764 452 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 RPP40O75818 363 aaKnown RBP13.5□□□□□ -0.25
VEGFA-216ENST00000512683 USP17L7P0C7H9 530 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 MAGEA11P43364 429 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 RAP1GAPP47736 663 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 PPP3CCP48454 512 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 TFAMQ00059 246 aaKnown RBP13.5□□□□□ -0.25
VEGFA-216ENST00000512683 FAM160A1Q05DH4 1040 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 DMWDQ09019 674 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 MYO1EQ12965 1108 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 MAPRE1Q15691 268 aaKnown RBP13.5□□□□□ -0.25
VEGFA-216ENST00000512683 INTS6LQ5JSJ4 861 aaKnown RBP13.5□□□□□ -0.25
VEGFA-216ENST00000512683 STXBP4Q6ZWJ1 553 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 DYMQ7RTS9 669 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 C11orf74Q86VG3 221 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 SFR1Q86XK3 245 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 C1orf127Q8N9H9 656 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 TTC8Q8TAM2 541 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 DNAJC19Q96DA6 116 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 FAM213AQ9BRX8 229 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms