RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 ETNK1Q9HBU6 452 aa12.54□□□□□ -0.4
PRDM16-207ENST00000512462 SLC5A4Q9NY91 659 aa12.54□□□□□ -0.4
PRDM16-207ENST00000512462 BTBD7Q9P203 1132 aa12.54□□□□□ -0.4
PRDM16-207ENST00000512462 ADCY3O60266 1144 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 PROSCO94903 275 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 KRT7P08729 469 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
PRDM16-207ENST00000512462 NRLP54845 237 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 TAF1CQ15572 869 aaPredicted RBP12.53□□□□□ -0.4
PRDM16-207ENST00000512462 MICAL1Q8TDZ2 1067 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 CGRRF1Q99675 332 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 SHCBP1LQ9BZQ2 653 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 NPHS2Q9NP85 383 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 XPO7Q9UIA9 1087 aaKnown RBP12.53□□□□□ -0.4
PRDM16-207ENST00000512462 TSR3Q9UJK0 312 aaKnown RBP12.53□□□□□ -0.4
PRDM16-207ENST00000512462 STRIP2Q9ULQ0 834 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 SDK1Q7Z5N4 2213 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 CFAP69A5D8W1 941 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 CELF2O95319 508 aaKnown RBP12.53□□□□□ -0.4
PRDM16-207ENST00000512462 RFC1P35251 1148 aaPredicted RBP12.53□□□□□ -0.4
PRDM16-207ENST00000512462 CTCFP49711 727 aaPredicted RBP12.53□□□□□ -0.4
PRDM16-207ENST00000512462 SNCBQ16143 134 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 FAM71AQ8IYT1 594 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 GPRC5AQ8NFJ5 357 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 DEPDC1BQ8WUY9 529 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 HBP1O60381 514 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 CPA2P48052 419 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 HUNKP57058 714 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 SNX16P57768 344 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 FKBP1AP62942 108 aaKnown RBP12.53□□□□□ -0.4
PRDM16-207ENST00000512462 BEX3Q00994 111 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 BMT2Q1RMZ1 405 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 SPOUT1Q5T280 376 aaKnown RBP12.53□□□□□ -0.4
PRDM16-207ENST00000512462 DENND1BQ6P3S1 775 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 TRIM72Q6ZMU5 477 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 FASTKD5Q7L8L6 764 aaKnown RBP12.53□□□□□ -0.4
PRDM16-207ENST00000512462 C2orf69Q8N8R5 385 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 CFAP61Q8NHU2 1237 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
PRDM16-207ENST00000512462 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.53□□□□□ -0.4
PRDM16-207ENST00000512462 LACTBL1A8MY62 500 aa12.52□□□□□ -0.4
PRDM16-207ENST00000512462 TXNDC9O14530 226 aa12.52□□□□□ -0.4
PRDM16-207ENST00000512462 SNAPC2Q13487 334 aa12.52□□□□□ -0.4
PRDM16-207ENST00000512462 SPARCL1Q14515 664 aa12.52□□□□□ -0.4
PRDM16-207ENST00000512462 PID1Q7Z2X4 250 aa12.52□□□□□ -0.4
PRDM16-207ENST00000512462 SDCCAG8Q86SQ7 713 aaPredicted RBP12.52□□□□□ -0.4
PRDM16-207ENST00000512462 BEST2Q8NFU1 509 aa12.52□□□□□ -0.4
PRDM16-207ENST00000512462 TMC2Q8TDI7 906 aa12.52□□□□□ -0.4
PRDM16-207ENST00000512462 EXT2Q93063 718 aa12.52□□□□□ -0.4
PRDM16-207ENST00000512462 CYTH2Q99418 400 aa12.52□□□□□ -0.4
PRDM16-207ENST00000512462 GCOM2Q9BZD3 368 aaPredicted RBP12.52□□□□□ -0.4
PRDM16-207ENST00000512462 PORCNQ9H237 461 aa12.52□□□□□ -0.4
PRDM16-207ENST00000512462 ASB14A6NK59 587 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 TNPO2O14787 897 aaKnown RBP12.52□□□□□ -0.41
PRDM16-207ENST00000512462 BNIP3LO60238 219 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 GH1P01241 217 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 ITIH2P19823 946 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 HSPA9P38646 679 aaKnown RBP12.52□□□□□ -0.41
PRDM16-207ENST00000512462 NAIF1Q69YI7 327 aaPredicted RBP12.52□□□□□ -0.41
PRDM16-207ENST00000512462 JADE1Q6IE81 842 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 MPZL3Q6UWV2 235 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 NPNTQ6UXI9 565 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 ARMCX2Q7L311 632 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 HES6Q96HZ4 224 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 CAMKK2Q96RR4 588 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 NT5C1AQ9BXI3 368 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 C17orf75Q9HAS0 396 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 COPEO14579 308 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 DHX15O43143 795 aaKnown RBP12.52□□□□□ -0.41
PRDM16-207ENST00000512462 FAM107AO95990 144 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 MYBL1P10243 752 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 ADORA2AP29274 412 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 EPHX2P34913 555 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 RFC5P40937 340 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 SLC1A1P43005 524 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 NDST1P52848 882 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 EML3Q32P44 896 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 FKBP1CQ5VVH2 108 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 HEATR6Q6AI08 1181 aaKnown RBP12.52□□□□□ -0.41
PRDM16-207ENST00000512462 TTC27Q6P3X3 843 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 RYBPQ8N488 228 aaPredicted RBP12.52□□□□□ -0.41
PRDM16-207ENST00000512462 UNKQ9C0B0 810 aaKnown RBP12.52□□□□□ -0.41
PRDM16-207ENST00000512462 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 DPP3Q9NY33 737 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 PSD3Q9NYI0 1048 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 ZNF214Q9UL59 606 aaPredicted RBP12.52□□□□□ -0.41
PRDM16-207ENST00000512462 MYH1P12882 1939 aa12.52□□□□□ -0.41
PRDM16-207ENST00000512462 SMCHD1A6NHR9 2005 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 KIAA0391O15091 583 aaKnown RBP12.51□□□□□ -0.41
PRDM16-207ENST00000512462 CREB1P16220 341 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 PECAM1P16284 738 aaPredicted RBP12.51□□□□□ -0.41
PRDM16-207ENST00000512462 KCNA2P16389 499 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 ANXA13P27216 316 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 MARSP56192 900 aaKnown RBP12.51□□□□□ -0.41
PRDM16-207ENST00000512462 RBP5P82980 135 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 CCDC14Q49A88 953 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 COBLL1Q53SF7 1204 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 GNASQ5JWF2 1037 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 MROH9Q5TGP6 573 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms