RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ARHGAP15Q53QZ3 475 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 WDR44Q5JSH3 913 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 RESP18Q5W5W9 173 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 LAIR1Q6GTX8 287 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 CNNM4Q6P4Q7 775 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 ITIH5Q86UX2 942 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 CCDC65Q8IXS2 484 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 SYCP3Q8IZU3 236 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 PDCL2Q8N4E4 241 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 SCFD1Q8WVM8 642 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 GCNAQ96QF7 691 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 PKMYT1Q99640 499 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 C7orf25Q9BPX7 421 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 LMAN1LQ9HAT1 526 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 DSEQ9UL01 958 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 AGAP1Q9UPQ3 857 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 EXOC7Q9UPT5 735 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 ASB3Q9Y575 518 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 EML5Q05BV3 1969 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 KPNA7A9QM74 516 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 DPYSL4O14531 572 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 CLIC2O15247 247 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 CHADO15335 359 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 KLRC4O43908 158 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 CHRNB1P11230 501 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 CCNE1P24864 410 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 AFMP43652 599 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 CXCL12P48061 93 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 CYP4F8P98187 520 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 POU5F1Q01860 360 aaKnown RBP11.74□□□□□ -0.53
RNF4-212ENST00000509258 SMARCB1Q12824 385 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 BFSP1Q12934 665 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 VEPH1Q14D04 833 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 FAM26FQ5R3K3 315 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 SDHAF4Q5VUM1 108 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 DNAJB7Q7Z6W7 309 aaPredicted RBP11.74□□□□□ -0.53
RNF4-212ENST00000509258 TMEM150AQ86TG1 271 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 METTL23Q86XA0 190 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 NELFCDQ8IXH7 590 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 GPD1LQ8N335 351 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 SPEM1Q8N4L4 309 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 CELF5Q8N6W0 485 aaKnown RBP11.74□□□□□ -0.53
RNF4-212ENST00000509258 RIN3Q8TB24 985 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 ZNF507Q8TCN5 953 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 FAM200AQ8TCP9 573 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 PLEKHO2Q8TD55 490 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 GIPC2Q8TF65 315 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 PSMG2Q969U7 264 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 RTKNQ9BST9 563 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 C8orf33Q9H7E9 229 aaPredicted RBP11.74□□□□□ -0.53
RNF4-212ENST00000509258 HSPBP1Q9NZL4 362 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 HSFX1Q9UBD0 423 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 SERTAD1Q9UHV2 236 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 ZMYM5Q9UJ78 669 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 RCOR1Q9UKL0 485 aa11.74□□□□□ -0.53
RNF4-212ENST00000509258 SLC38A8A6NNN8 435 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 ACTN4O43707 911 aaKnown RBP11.73□□□□□ -0.53
RNF4-212ENST00000509258 LRP3O75074 770 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 ATP2C2O75185 946 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 PAPSS2O95340 614 aaPredicted RBP11.73□□□□□ -0.53
RNF4-212ENST00000509258 PRAMEF12O95522 483 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 HAPLN1P10915 354 aaPredicted RBP11.73□□□□□ -0.53
RNF4-212ENST00000509258 TGM1P22735 817 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 ME1P48163 572 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 TUFMP49411 452 aaKnown RBP11.73□□□□□ -0.53
RNF4-212ENST00000509258 KPNA1P52294 538 aaPredicted RBP11.73□□□□□ -0.53
RNF4-212ENST00000509258 ATXN1P54253 815 aaKnown RBP11.73□□□□□ -0.53
RNF4-212ENST00000509258 CACNA1BQ00975 2339 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 SATB1Q01826 763 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 ALCAMQ13740 583 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 TAF12Q16514 161 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 SV2CQ496J9 727 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 PRR23BQ6ZRT6 265 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 RALGPS2Q86X27 583 aaPredicted RBP11.73□□□□□ -0.53
RNF4-212ENST00000509258 NT5DC4Q86YG4 428 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 THEM5Q8N1Q8 247 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 CSGALNACT2Q8N6G5 542 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 ELMO3Q96BJ8 720 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 SEPT5Q99719 369 aaPredicted RBP11.73□□□□□ -0.53
RNF4-212ENST00000509258 SMG9Q9H0W8 520 aaKnown RBP11.73□□□□□ -0.53
RNF4-212ENST00000509258 PARD6AQ9NPB6 346 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 AGPAT3Q9NRZ7 376 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 INTS13Q9NVM9 706 aa11.73□□□□□ -0.53
RNF4-212ENST00000509258 ABI2Q9NYB9 513 aaPredicted RBP11.73□□□□□ -0.53
RNF4-212ENST00000509258 SPECC1L-ADORA2AF8WAN1 911 aa11.72□□□□□ -0.53
RNF4-212ENST00000509258 EIF3DO15371 548 aaKnown RBP eCLIP11.72□□□□□ -0.53
RNF4-212ENST00000509258 TADA3O75528 432 aa11.72□□□□□ -0.53
RNF4-212ENST00000509258 RETP07949 1114 aa11.72□□□□□ -0.53
RNF4-212ENST00000509258 HMGA1P17096 107 aaKnown RBP11.72□□□□□ -0.53
RNF4-212ENST00000509258 GABRR2P28476 465 aa11.72□□□□□ -0.53
RNF4-212ENST00000509258 HOXC13P31276 330 aa11.72□□□□□ -0.53
RNF4-212ENST00000509258 CTHP32929 405 aa11.72□□□□□ -0.53
RNF4-212ENST00000509258 CNR2P34972 360 aa11.72□□□□□ -0.53
RNF4-212ENST00000509258 CYP2J2P51589 502 aa11.72□□□□□ -0.53
RNF4-212ENST00000509258 SPEM2Q0P670 501 aa11.72□□□□□ -0.53
RNF4-212ENST00000509258 GAS6Q14393 721 aa11.72□□□□□ -0.53
RNF4-212ENST00000509258 LPAL2Q16609 132 aa11.72□□□□□ -0.53
RNF4-212ENST00000509258 SOWAHAQ2M3V2 549 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms