RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 GRK7Q8WTQ7 553 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 NACC2Q96BF6 587 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 SYT11Q9BT88 431 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 FOXP3Q9BZS1 431 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 KCTD10Q9H3F6 313 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 ARMC7Q9H6L4 198 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 LIN28AQ9H9Z2 209 aaKnown RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 PPP1R1BQ9UD71 204 aaPredicted RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 INPP5FQ9Y2H2 1132 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 RABGAP1Q9Y3P9 1069 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 COL5A2P05997 1499 aaPredicted RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 LAMB2P55268 1798 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 BAZ2AQ9UIF9 1905 aaKnown RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 TMEM114B3SHH9 223 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 DLATP10515 647 aaKnown RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 ENDOUP21128 410 aaKnown RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 SOX5P35711 763 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 PHKA1P46020 1223 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 ALDH3B2P48448 385 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 SGO2Q562F6 1265 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 DCAF6Q58WW2 860 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 CYP4F22Q6NT55 531 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 PAOXQ6QHF9 649 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 LARGE2Q8N3Y3 721 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 CD101Q93033 1021 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 CCDC127Q96BQ5 260 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 PLEKHA8Q96JA3 519 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 MAK16Q9BXY0 300 aaKnown RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 CLK4Q9HAZ1 481 aaKnown RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 VTA1Q9NP79 307 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 GID8Q9NWU2 228 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 PCDHGB4Q9UN71 923 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 PCDHGB5Q9Y5G0 923 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 A0A1W2PPM1 405 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 C2orf71A6NGG8 1288 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 H3BNX3 289 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 TNFRSF10AO00220 468 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 PFDN6O15212 129 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 CCNT1O60563 726 aaKnown RBP10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 ESRRBO95718 433 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 PLS3P13797 630 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 RAG1P15918 1043 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 COMTP21964 271 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 ADCY8P40145 1251 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 ALDH1A3P47895 512 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 GSSP48637 474 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 C21orf59P57076 290 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 TUBA4AP68366 448 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 KDSRQ06136 332 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 PRKD1Q15139 912 aaPredicted RBP10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 CNGA3Q16281 694 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 FAM209AQ5JX71 171 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 IYDQ6PHW0 289 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 ISLR2Q6UXK2 745 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 TPTE2Q6XPS3 522 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 C14orf80Q86SX3 495 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 POU5F2Q8N7G0 328 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 VGLL2Q8N8G2 317 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 C1orf54Q8WWF1 131 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 DNAJC19Q96DA6 116 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 CNBD2Q96M20 576 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 RANBP9Q96S59 729 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 MKNK1Q9BUB5 465 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 BTG4Q9NY30 223 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 SLC24A2Q9UI40 661 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 N6AMT1Q9Y5N5 214 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 AP4B1Q9Y6B7 739 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 SQORQ9Y6N5 450 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 FSCN2O14926 492 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 MCF2LO15068 1137 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 KRT4P19013 534 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 CIITAP33076 1130 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 CPOXP36551 454 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 SLC5A3P53794 718 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 PHKG1Q16816 387 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 FAAH2Q6GMR7 532 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 GJB7Q6PEY0 223 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 MIER3Q7Z3K6 550 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 KRT27Q7Z3Y8 459 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 AMIGO2Q86SJ2 522 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 PPM1KQ8N3J5 372 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 PAIP1Q9H074 479 aaKnown RBP10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 PALMDQ9NP74 551 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 KCNK4Q9NYG8 393 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 GCNT4Q9P109 453 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 PSMC3IPQ9P2W1 217 aaPredicted RBP10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 SOX13Q9UN79 622 aa10.49□□□□□ -0.73
PDGFRA-207ENST00000509092 MYOCOSA0A1B0GUC4 107 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 DCAF8L1A6NGE4 600 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 ARHGAP42A6NI28 874 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 AQP9O43315 295 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 CYTH3O43739 400 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 SPOPO43791 374 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 ZBTB11O95625 1053 aaPredicted RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 STAMBPO95630 424 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 POLR2MP0CAP2 368 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 POLR2EP19388 210 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 TNFAIP3P21580 790 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 PRDX6P30041 224 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms