RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3□□□□□ -1.93
DEPDC1B-204ENST00000509006 EID1Q9Y6B2 187 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 E2F8A0AVK6 867 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 TISP43B9A030 160 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 NT5C1B-RDH14C9J2C7 533 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 PRR23D1E9PI22 279 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 F2RL2O00254 374 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 ZNF213O14771 459 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 PPEF2O14830 753 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 PCDHGA12O60330 932 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 TOP3BO95985 862 aaKnown RBP2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 HNRNPCP07910 306 aaKnown RBP eCLIP2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 PRR23D2P0DMB1 279 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 NR2F6P10588 404 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 JUPP14923 745 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 NDUFV1P49821 464 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 TCF15Q12870 199 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 UBE4AQ14139 1066 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 SUMO4Q6EEV6 95 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 SLC2A7Q6PXP3 512 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 AMOTL1Q8IY63 956 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 SAMD14Q8IZD0 417 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 C1orf162Q8NEQ5 155 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 NSUN6Q8TEA1 469 aaKnown RBP2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 STAG1Q8WVM7 1258 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 SCAMP4Q969E2 229 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 SMOQ99835 787 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 QTRT1Q9BXR0 403 aaKnown RBP2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 SMOC2Q9H3U7 446 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 SIDT1Q9NXL6 827 aaKnown RBP2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 EHD3Q9NZN3 535 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 PCDHGA9Q9Y5G4 932 aaKnown RBP2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 PCDHGA8Q9Y5G5 932 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 PCDHGA7Q9Y5G6 932 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 PCDHGA6Q9Y5G7 932 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 PCDHGA3Q9Y5H0 932 aa2.99□□□□□ -1.93
DEPDC1B-204ENST00000509006 CCDC154A6NI56 674 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 F5H697 171 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 FZD9O00144 591 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 POLRMTO00411 1230 aaKnown RBP2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 INSIG1O15503 277 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 TRIAP1O43715 76 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 CENPBP07199 599 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 EBLN1P0CF75 366 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 SNHG28P0DPA3 235 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 ZFXP17010 805 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 SFPQP23246 707 aaKnown RBP eCLIP2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 IARSP41252 1262 aaKnown RBP2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 FXR1P51114 621 aaKnown RBP eCLIP2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 SLC16A1P53985 500 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 DSC2Q02487 901 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 C4orf46Q504U0 113 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 CCDC93Q567U6 631 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 SLC18B1Q6NT16 456 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 TAF2Q6P1X5 1199 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 CNTD1Q8N815 330 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 ATL2Q8NHH9 583 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 KAT5Q92993 513 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 FKBP10Q96AY3 582 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 COA7Q96BR5 231 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 CLPTM1LQ96KA5 538 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 ZNF700Q9H0M5 742 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 GPR35Q9HC97 309 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 SERHLQ9NQF3 203 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 RLIMQ9NVW2 624 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 SERPINB13Q9UIV8 391 aa2.98□□□□□ -1.93
DEPDC1B-204ENST00000509006 NPHP1O15259 732 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 ALDH1L1O75891 902 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 CYP2D6P10635 497 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 MALP21145 153 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 CERS1P27544 350 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 GNALP38405 381 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 SNAPC2Q13487 334 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 BMPR2Q13873 1038 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 HABP2Q14520 560 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 CLUL1Q15846 466 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 BRDTQ58F21 947 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 CEP78Q5JTW2 689 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 CEP85Q6P2H3 762 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 TMED8Q6PL24 325 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 SLC30A10Q6XR72 485 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 GADL1Q6ZQY3 521 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 ZNF551Q7Z340 670 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 PPP1R32Q7Z5V6 425 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 NECAB2Q7Z6G3 386 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 PAF1Q8N7H5 531 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 PSD4Q8NDX1 1056 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 PPM1EQ8WY54 764 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 VRK1Q99986 396 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 ACTRT3Q9BYD9 372 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 TPSD1Q9BZJ3 242 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 PUS7LQ9H0K6 701 aaKnown RBP2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 TERF2IPQ9NYB0 399 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 AGAP1Q9UPQ3 857 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 NR2E3Q9Y5X4 410 aa2.97□□□□□ -1.93
DEPDC1B-204ENST00000509006 ZNF785A8K8V0 405 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 MYO1FO00160 1098 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 ADAMTS3O15072 1205 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 TSPAN6O43657 245 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms