RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 SLFN11Q7Z7L1 901 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 UBR7Q8N806 425 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 SLC43A3Q8NBI5 491 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 ARRDC4Q8NCT1 418 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 ZSWIM2Q8NEG5 633 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 SPATA18Q8TC71 538 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 TRAPPC12Q8WVT3 735 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 RFFLQ8WZ73 363 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 RUBCNQ92622 972 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 BHMTQ93088 406 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCSER1-207ENST00000508550 CELF4Q9BZC1 486 aaKnown RBP8.63□□□□□ -1.03
CCSER1-207ENST00000508550 GSX2Q9BZM3 304 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 NIF3L1Q9GZT8 377 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 LACRTQ9GZZ8 138 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 UBN1Q9NPG3 1134 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 CNTN3Q9P232 1028 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 UVRAGQ9P2Y5 699 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 NOCTQ9UK39 431 aaKnown RBP8.63□□□□□ -1.03
CCSER1-207ENST00000508550 GUCA1BQ9UMX6 200 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 SAR1BQ9Y6B6 198 aa8.63□□□□□ -1.03
CCSER1-207ENST00000508550 NCANO14594 1321 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 LILRB5O75023 590 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 ZNF623O75123 536 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 PHACTR2O75167 634 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 PARNO95453 639 aaKnown RBP8.62□□□□□ -1.03
CCSER1-207ENST00000508550 VTNP04004 478 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 PLEKP08567 350 aaPredicted RBP8.62□□□□□ -1.03
CCSER1-207ENST00000508550 ATF7P17544 494 aaPredicted RBP8.62□□□□□ -1.03
CCSER1-207ENST00000508550 RAB27AP51159 221 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 NOP14P78316 857 aaKnown RBP8.62□□□□□ -1.03
CCSER1-207ENST00000508550 GPC5P78333 572 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 AMPD2Q01433 879 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 CYP27A1Q02318 531 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 CKAP4Q07065 602 aaKnown RBP8.62□□□□□ -1.03
CCSER1-207ENST00000508550 SNX17Q15036 470 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 TMEM132AQ24JP5 1023 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 SLC10A6Q3KNW5 377 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 CRTC2Q53ET0 693 aaPredicted RBP8.62□□□□□ -1.03
CCSER1-207ENST00000508550 DPH6Q7L8W6 267 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 CATSPER4Q7RTX7 472 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 MTERF4Q7Z6M4 381 aaKnown RBP8.62□□□□□ -1.03
CCSER1-207ENST00000508550 ARHGEF19Q8IW93 802 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 CXorf38Q8TB03 319 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 RAET1EQ8TD07 263 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 CTNNBL1Q8WYA6 563 aaPredicted RBP8.62□□□□□ -1.03
CCSER1-207ENST00000508550 DDX1Q92499 740 aaKnown RBP8.62□□□□□ -1.03
CCSER1-207ENST00000508550 SCLT1Q96NL6 688 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 WDR24Q96S15 920 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 POP1Q99575 1024 aaKnown RBP8.62□□□□□ -1.03
CCSER1-207ENST00000508550 BCO2Q9BYV7 579 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 PPP1R12CQ9BZL4 782 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 MIS12Q9H081 205 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 XYLT2Q9H1B5 865 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 LHX5Q9H2C1 402 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 HDAC6Q9UBN7 1215 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 GTF3C4Q9UKN8 822 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 GABRQQ9UN88 632 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 TRPV2Q9Y5S1 764 aa8.62□□□□□ -1.03
CCSER1-207ENST00000508550 MYH9P35579 1960 aaKnown RBP8.61□□□□□ -1.03
CCSER1-207ENST00000508550 ZNFX1Q9P2E3 1918 aaKnown RBP8.61□□□□□ -1.03
CCSER1-207ENST00000508550 GRID2IPA4D2P6 1211 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 FAM229AH3BQW9 127 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 TREHO43280 583 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 B4GALT5O43286 388 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 MED7O43513 233 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 AOC2O75106 756 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 URI1O94763 535 aaPredicted RBP8.61□□□□□ -1.03
CCSER1-207ENST00000508550 CYP1A1P04798 512 aaPredicted RBP8.61□□□□□ -1.03
CCSER1-207ENST00000508550 ASGR1P07306 291 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 COL6A1P12109 1028 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 UNGP13051 313 aaPredicted RBP8.61□□□□□ -1.03
CCSER1-207ENST00000508550 IGFBP4P22692 258 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 CDH5P33151 784 aaPredicted RBP8.61□□□□□ -1.03
CCSER1-207ENST00000508550 GSCP56915 257 aaPredicted RBP8.61□□□□□ -1.03
CCSER1-207ENST00000508550 MRPS6P82932 125 aaKnown RBP8.61□□□□□ -1.03
CCSER1-207ENST00000508550 MGAT3Q09327 533 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 INCA1Q0VD86 236 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 MYO1EQ12965 1108 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 TMEM132DQ14C87 1099 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 KCNA10Q16322 511 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 PPP2R5EQ16537 467 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 ARHGAP44Q17R89 818 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 KIZQ2M2Z5 673 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 ACAD10Q6JQN1 1059 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 UNC93AQ86WB7 457 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 SLC35F6Q8N357 371 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 BEST2Q8NFU1 509 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 OR5B17Q8NGF7 314 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 OLIG1Q8TAK6 271 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 DNAJB3Q8WWF6 145 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 PBKQ96KB5 322 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 RPS6KC1Q96S38 1066 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 SENP6Q9GZR1 1112 aaPredicted RBP8.61□□□□□ -1.03
CCSER1-207ENST00000508550 TPSG1Q9NRR2 321 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 SLC38A7Q9NVC3 462 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 TTC7AQ9ULT0 858 aaPredicted RBP8.61□□□□□ -1.03
CCSER1-207ENST00000508550 UBQLN1Q9UMX0 589 aaKnown RBP8.61□□□□□ -1.03
CCSER1-207ENST00000508550 SNX12Q9UMY4 172 aa8.61□□□□□ -1.03
CCSER1-207ENST00000508550 GIT1Q9Y2X7 761 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms