RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 NPHP3-ACAD11A0A0J9YXS1 232 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 FAM237AA0A1B0GTK4 181 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 MYMKA6NI61 221 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 CYSRT1A8MQ03 144 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 HNRNPDLO14979 420 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 POLR2DO15514 142 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 AKAP3O75969 853 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 LRG1P02750 347 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 CACNB1Q02641 598 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 MRPL58Q14197 206 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 POSTNQ15063 836 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 EEF1DP3Q658K8 133 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 ANKS3Q6ZW76 656 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 PDZD4Q76G19 769 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 ZNF720Q7Z2F6 126 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 RALGPS2Q86X27 583 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 CD302Q8IX05 232 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 TTC8Q8TAM2 541 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 DHX58Q96C10 678 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 UROC1Q96N76 676 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 ACAP3Q96P50 834 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 FIZ1Q96SL8 496 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 C7orf25Q9BPX7 421 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 TARS2Q9BW92 718 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 TRIM9Q9C026 710 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 DNAJC25Q9H1X3 360 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 C8orf33Q9H7E9 229 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 TMEM206Q9H813 350 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 GPSM3Q9Y4H4 160 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 UBE4BO95155 1302 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 PI4KAP42356 2102 aa9.98□□□□□ -0.81
UBE2D3-223ENST00000508249 A0A087X0B3 334 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 PVALEFA0A1B0GWK0 134 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 BCLAF3A2AJT9 711 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 OTOL1A6NHN0 477 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 ABLIM1O14639 778 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 ZNF197O14709 1029 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 DCLK1O15075 740 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 KIAA0391O15091 583 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 EIF3DO15371 548 aaKnown RBP eCLIP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 MEFVO15553 781 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 XPOTO43592 962 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 HYAL3O43820 417 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 B3GAT3O94766 335 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 PRAMEF12O95522 483 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 CLTAP09496 248 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 SLFN14P0C7P3 912 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 CEACAM1P13688 526 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 IDEP14735 1019 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 CSRP1P21291 193 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 MATR3P43243 847 aaKnown RBP eCLIP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 SNRPFP62306 86 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 ASIC1P78348 528 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 TNK2Q07912 1038 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 XKR4Q5GH76 650 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 FSTL4Q6MZW2 842 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 KIAA1211LQ6NV74 962 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 C1orf228Q6PIY5 440 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 UNC13DQ70J99 1090 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 DYMQ7RTS9 669 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 SFR1Q86XK3 245 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 BEST2Q8NFU1 509 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 EZH1Q92800 747 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 ACCSQ96QU6 501 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 PANK2Q9BZ23 570 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 MRPL44Q9H9J2 332 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 PLEKHA5Q9HAU0 1116 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 POLD4Q9HCU8 107 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 PANK4Q9NVE7 773 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 FBXL5Q9UKA1 691 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 NEUROG3Q9Y4Z2 214 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 PTPRBP23467 1997 aa9.97□□□□□ -0.81
UBE2D3-223ENST00000508249 APC2O95996 2303 aa9.96□□□□□ -0.81
UBE2D3-223ENST00000508249 CEP192Q8TEP8 1941 aa9.96□□□□□ -0.81
UBE2D3-223ENST00000508249 ZNF638Q14966 1978 aaKnown RBP9.96□□□□□ -0.81
UBE2D3-223ENST00000508249 GOLGA6L4A6NEF3 574 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 PATE3B3GLJ2 98 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 PRRG1O14668 218 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 OGTO15294 1046 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 PPP1R37O75864 691 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 LDHAP00338 332 aaKnown RBP9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 KCNE1P15382 129 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 PAX3P23760 479 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 SYKP43405 635 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 TWF1Q12792 350 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 TMEM196Q5HYL7 178 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 L1TD1Q5T7N2 865 aaKnown RBP9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 NAIF1Q69YI7 327 aaPredicted RBP9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 PROSER1Q86XN7 944 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 GPIHBP1Q8IV16 184 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 TMEM130Q8N3G9 435 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 SYNPOQ8N3V7 929 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 RIN3Q8TB24 985 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 CCDC47Q96A33 483 aaKnown RBP9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 STRA6Q9BX79 667 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 CYP4F11Q9HBI6 524 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 CNTN3Q9P232 1028 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 ANKFY1Q9P2R3 1169 aa9.96□□□□□ -0.82
UBE2D3-223ENST00000508249 HPSEQ9Y251 543 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms