RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 TCRBV7S3A2A0A539 114 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 TESPA1A2RU30 521 aaPredicted RBP14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 GSC2O15499 205 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 ZBED4O75132 1171 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 GARTP22102 1010 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 SERPINB3P29508 390 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 RASA2Q15283 850 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 CCDC6Q16204 474 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 GNPTABQ3T906 1256 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 RHPN2Q8IUC4 686 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 PYROXD1Q8WU10 500 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 FAM136AQ96C01 138 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 VCPIP1Q96JH7 1222 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 BTBD10Q9BSF8 475 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 HAPLN2Q9GZV7 340 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 MANSC1Q9H8J5 431 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 PCDH9Q9HC56 1237 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 NUB1Q9Y5A7 615 aa14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 COL2A1P02458 1487 aaPredicted RBP14.12□□□□□ -0.15
SNCAIP-209ENST00000508017 ATP2A1O14983 1001 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 EXTL3O43909 919 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 RFC5P40937 340 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 CDKN2BP42772 138 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 JAK3P52333 1124 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 INHBEP58166 350 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 PSMD6Q15008 389 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 FAM182AQ5T1J6 154 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 SNX30Q5VWJ9 437 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 ADGRD1Q6QNK2 874 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 C3orf62Q6ZUJ4 267 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 TTC7BQ86TV6 843 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 BANPQ8N9N5 519 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 ZNF398Q8TD17 642 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 DTX3LQ8TDB6 740 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 DCAKDQ8WVC6 231 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 WDR60Q8WVS4 1066 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 CPT1BQ92523 772 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 NKD2Q969F2 451 aaPredicted RBP14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 KCNK13Q9HB14 408 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 SSU72Q9NP77 194 aaKnown RBP14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 XPNPEP1Q9NQW7 623 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 DLGAP2Q9P1A6 1054 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 GABBR1Q9UBS5 961 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 CCDC22O60826 627 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 ITGAVP06756 1048 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 MMP8P22894 467 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 SP100P23497 879 aaPredicted RBP14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 VHLP40337 213 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 LIG4P49917 911 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 CLDN10P78369 228 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 TFDP3Q5H9I0 405 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 FBXO36Q8NEA4 188 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 ZBTB45Q96K62 511 aaPredicted RBP14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 DHRS4Q9BTZ2 278 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 TSSK1BQ9BXA7 367 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 TMEM120AQ9BXJ8 343 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 STOML1Q9UBI4 398 aa14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 RPL26L1Q9UNX3 145 aaKnown RBP14.11□□□□□ -0.15
SNCAIP-209ENST00000508017 LMNAP02545 664 aaKnown RBP14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 SP4Q02446 784 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 MCL1Q07820 350 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 ATP11CQ8NB49 1132 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 PHC3Q8NDX5 983 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 SLC35B2Q8TB61 432 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 ZNF606Q8WXB4 792 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 SCG3Q8WXD2 468 aaKnown RBP14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 SKA1Q96BD8 255 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 NSL1Q96IY1 281 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 TRIM55Q9BYV6 548 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 ACSS3Q9H6R3 686 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 ZNRF3Q9ULT6 936 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 CNTNAP1P78357 1384 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 YDJCA8MPS7 323 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 CAPN9O14815 690 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 GYG2O15488 501 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 SMIM24O75264 130 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 TBX10O75333 385 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 TMEM63AO94886 807 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 STBD1O95210 358 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 FESP07332 822 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 GNAT1P11488 350 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 ARFIP2P53365 341 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 NRLP54845 237 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 RCN2Q14257 317 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 LBRQ14739 615 aaKnown RBP14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 SMTNL2Q2TAL5 461 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 RNF220Q5VTB9 566 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 NAT8LQ8N9F0 302 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 OR5B17Q8NGF7 314 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 TEKT4Q8WW24 435 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 TSC22D3Q99576 134 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 TMEM39BQ9GZU3 492 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 SNCAIPQ9Y6H5 919 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 KAT6AQ92794 2004 aa14.1□□□□□ -0.15
SNCAIP-209ENST00000508017 TCRBV5S1A1TA0A578 114 aa14.09□□□□□ -0.15
SNCAIP-209ENST00000508017 HNRNPCL1O60812 293 aaKnown RBP14.09□□□□□ -0.15
SNCAIP-209ENST00000508017 NPTXRO95502 500 aa14.09□□□□□ -0.15
SNCAIP-209ENST00000508017 BGNP21810 368 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms