RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 NLRX1Q86UT6 975 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 FIBCD1Q8N539 461 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 CNNM3Q8NE01 707 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 RDM1Q8NG50 284 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 P2RX7Q99572 595 aaKnown RBP7.69□□□□□ -1.18
CLCN3-206ENST00000507875 CCM2LQ9NUG4 571 aaPredicted RBP7.69□□□□□ -1.18
CLCN3-206ENST00000507875 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLCN3-206ENST00000507875 TUBE1Q9UJT0 475 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 N6AMT1Q9Y5N5 214 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 IGLV3-22A0A075B6J6 115 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.69□□□□□ -1.18
CLCN3-206ENST00000507875 KLHL33A6NCF5 533 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 H0Y3Z8 333 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 CYP11A1P05108 521 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 SLC9A1P19634 815 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 FGFR3P22607 806 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 PTGS1P23219 599 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 PPP1R2P41236 205 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 DNM2P50570 870 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 NT5DC1Q5TFE4 455 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 KRT79Q5XKE5 535 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 FAM117BQ6P1L5 589 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 KCNV1Q6PIU1 500 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 OTOP3Q7RTS5 596 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 CCDC186Q7Z3E2 898 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 MILR1Q7Z6M3 343 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 CABP7Q86V35 215 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 PTRH1Q86Y79 214 aaKnown RBP7.69□□□□□ -1.18
CLCN3-206ENST00000507875 ETNPPLQ8TBG4 499 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 KIAA1524Q8TCG1 905 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 HVCN1Q96D96 273 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 TMEM60Q9H2L4 133 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 PXMP2Q9NR77 195 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 TBC1D22BQ9NU19 505 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 LRWD1Q9UFC0 647 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 CCL15-CCL14A0A0B4J2E2 113 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 SMTNL1A8MU46 457 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 TM4SF5O14894 197 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 NCK2O43639 380 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 STRNO43815 780 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 ADAM11O75078 769 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 CNMDO75829 334 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 TDP2O95551 362 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 MECP2P51608 486 aaKnown RBP7.68□□□□□ -1.18
CLCN3-206ENST00000507875 SNX16P57768 344 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 RPS6P62753 249 aaKnown RBP7.68□□□□□ -1.18
CLCN3-206ENST00000507875 IL17AQ16552 155 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 CCL15Q16663 113 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 MUM1L1Q5H9M0 696 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 RRAGBQ5VZM2 374 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 MRPL41Q8IXM3 137 aaKnown RBP7.68□□□□□ -1.18
CLCN3-206ENST00000507875 MYCT1Q8N699 235 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 AOPEPQ8N6M6 819 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 PPM1NQ8N819 430 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 PGBD4Q96DM1 585 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 TMEM169Q96HH4 297 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 RCC1LQ96I51 464 aaKnown RBP7.68□□□□□ -1.18
CLCN3-206ENST00000507875 POLR3CQ9BUI4 534 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-206ENST00000507875 TRIM6Q9C030 488 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-206ENST00000507875 TUFT1Q9NNX1 390 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 RMND1Q9NWS8 449 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 CYP39A1Q9NYL5 469 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 NFASCO94856 1347 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 BIN1O00499 593 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 NFIBO00712 420 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 KPNA5O15131 536 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 SLC37A4O43826 429 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 DKC1O60832 514 aaKnown RBP eCLIP7.68□□□□□ -1.18
CLCN3-206ENST00000507875 LRRN2O75325 713 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 THBDP07204 575 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 HOXA13P31271 388 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-206ENST00000507875 ICAM3P32942 547 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 PTSQ03393 145 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 C19orf57Q0VDD7 668 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 PGM5Q15124 567 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 ARHGEF16Q5VV41 709 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 C7orf61Q8IZ16 206 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 IL22RA1Q8N6P7 574 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 CHST14Q8NCH0 376 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 GIMAP8Q8ND71 665 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-206ENST00000507875 STON2Q8WXE9 905 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 CCT6BQ92526 530 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 HAS1Q92839 578 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 LENG9Q96B70 501 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 GSDMAQ96QA5 445 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 PDCD2LQ9BRP1 358 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 RNF38Q9H0F5 515 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 KRT82Q9NSB4 513 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 C1orf112Q9NSG2 853 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 CHCHD3Q9NX63 227 aaKnown RBP7.68□□□□□ -1.18
CLCN3-206ENST00000507875 DCAF16Q9NXF7 216 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 GPRC5BQ9NZH0 403 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 PYCARDQ9ULZ3 195 aa7.68□□□□□ -1.18
CLCN3-206ENST00000507875 RRP15Q9Y3B9 282 aaKnown RBP7.68□□□□□ -1.18
CLCN3-206ENST00000507875 LOC100289279A0A1B0GTE1 492 aa7.67□□□□□ -1.18
CLCN3-206ENST00000507875 ARVCFO00192 962 aa7.67□□□□□ -1.18
CLCN3-206ENST00000507875 PDHXO00330 501 aa7.67□□□□□ -1.18
CLCN3-206ENST00000507875 POLR2DO15514 142 aaKnown RBP7.67□□□□□ -1.18
CLCN3-206ENST00000507875 NCAM1P13591 858 aa7.67□□□□□ -1.18
CLCN3-206ENST00000507875 C5AR1P21730 350 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms